auto: deploy new website

Author: nipreps-bot

404.html

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       <link rel="icon" href="/assets/nipreps_brain.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.49">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.50">
 
 
 
         <title>NiPreps</title>
 
 
 
-      <link rel="stylesheet" href="/assets/stylesheets/main.6f8fc17f.min.css">
+      <link rel="stylesheet" href="/assets/stylesheets/main.a40c8224.min.css">
 
 
 
@@ -856,10 +856,10 @@ <h1>404 - Not found</h1>
     </div>
 
 
-    <script id="__config" type="application/json">{"base": "/", "features": ["content.tabs.link"], "search": "/assets/javascripts/workers/search.6ce7567c.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
+    <script id="__config" type="application/json">{"base": "/", "features": ["content.tabs.link"], "search": "/assets/javascripts/workers/search.f8cc74c7.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="/assets/javascripts/bundle.88dd0f4e.min.js"></script>
+      <script src="/assets/javascripts/bundle.60a45f97.min.js"></script>
 
 
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apps/datalad/index.html

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       <link rel="icon" href="../../assets/nipreps_brain.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.49">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.50">
 
 
 
         <title>Git-Annex and DataLad within containers - NiPreps</title>
 
 
 
-      <link rel="stylesheet" href="../../assets/stylesheets/main.6f8fc17f.min.css">
+      <link rel="stylesheet" href="../../assets/stylesheets/main.a40c8224.min.css">
 
 
 
@@ -1176,10 +1176,10 @@ <h2 id="datalad-and-singularityapptainer"><em>DataLad</em> and <em>Singularity</
     </div>
 
 
-    <script id="__config" type="application/json">{"base": "../..", "features": ["content.tabs.link"], "search": "../../assets/javascripts/workers/search.6ce7567c.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
+    <script id="__config" type="application/json">{"base": "../..", "features": ["content.tabs.link"], "search": "../../assets/javascripts/workers/search.f8cc74c7.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.88dd0f4e.min.js"></script>
+      <script src="../../assets/javascripts/bundle.60a45f97.min.js"></script>
 
 
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apps/docker/index.html

@@ -22,15 +22,15 @@
 
 
       <link rel="icon" href="../../assets/nipreps_brain.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.49">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.50">
 
 
 
         <title>Executing with Docker - NiPreps</title>
 
 
 
-      <link rel="stylesheet" href="../../assets/stylesheets/main.6f8fc17f.min.css">
+      <link rel="stylesheet" href="../../assets/stylesheets/main.a40c8224.min.css">
 
 
 
@@ -1388,10 +1388,10 @@ <h3 id="resource-constraints">Resource constraints<a class="headerlink" href="#r
     </div>
 
 
-    <script id="__config" type="application/json">{"base": "../..", "features": ["content.tabs.link"], "search": "../../assets/javascripts/workers/search.6ce7567c.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
+    <script id="__config" type="application/json">{"base": "../..", "features": ["content.tabs.link"], "search": "../../assets/javascripts/workers/search.f8cc74c7.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.88dd0f4e.min.js"></script>
+      <script src="../../assets/javascripts/bundle.60a45f97.min.js"></script>
 
 
   </body>

apps/framework/index.html

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       <link rel="icon" href="../../assets/nipreps_brain.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.49">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.50">
 
 
 
         <title>Introduction - NiPreps</title>
 
 
 
-      <link rel="stylesheet" href="../../assets/stylesheets/main.6f8fc17f.min.css">
+      <link rel="stylesheet" href="../../assets/stylesheets/main.a40c8224.min.css">
 
 
 
@@ -1118,10 +1118,10 @@ <h2 id="what-are-bids-derivatives">What are <em>BIDS Derivatives</em>?<a class="
     </div>
 
 
-    <script id="__config" type="application/json">{"base": "../..", "features": ["content.tabs.link"], "search": "../../assets/javascripts/workers/search.6ce7567c.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
+    <script id="__config" type="application/json">{"base": "../..", "features": ["content.tabs.link"], "search": "../../assets/javascripts/workers/search.f8cc74c7.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.88dd0f4e.min.js"></script>
+      <script src="../../assets/javascripts/bundle.60a45f97.min.js"></script>
 
 
   </body>

apps/singularity/index.html

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       <link rel="icon" href="../../assets/nipreps_brain.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.49">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.50">
 
 
 
         <title>Executing with Singularity - NiPreps</title>
 
 
 
-      <link rel="stylesheet" href="../../assets/stylesheets/main.6f8fc17f.min.css">
+      <link rel="stylesheet" href="../../assets/stylesheets/main.a40c8224.min.css">
 
 
 
@@ -1046,6 +1046,11 @@ <h1>Executing with Singularity</h1>
 <p>Here, we describe how to run <em>NiPreps</em> with Singularity containers.
 To illustrate the process, we will show the execution of <em>fMRIPrep</em>, but these guidelines extend to any other end-user <em>NiPrep</em>.</p>
 </div>
+<div class="admonition warning">
+<p class="admonition-title">Apptainer</p>
+<p>In 2021, <a href="https://apptainer.org/news/community-announcement-20211130/"><em>Singularity</em> was rebranded as <em>Apptainer</em> when the project was transferred to the Linux Foundation</a>.
+As noted in the community announcement, all the commands below that contain <code>singularity</code> as the command line executable will execute <em>Apptainer</em> and can be replaced with the <code>apptainer</code> command with no change in function. </p>
+</div>
 <h2 id="preparing-a-singularity-image">Preparing a Singularity image<a class="headerlink" href="#preparing-a-singularity-image" title="Permanent link">&para;</a></h2>
 <p><strong>Singularity version &gt;= 2.5</strong>:
 If the version of Singularity installed on your HPC (High-Performance Computing)
@@ -1456,10 +1461,10 @@ <h2 id="running-singularity-on-a-slurm-system">Running Singularity on a SLURM sy
     </div>
 
 
-    <script id="__config" type="application/json">{"base": "../..", "features": ["content.tabs.link"], "search": "../../assets/javascripts/workers/search.6ce7567c.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
+    <script id="__config" type="application/json">{"base": "../..", "features": ["content.tabs.link"], "search": "../../assets/javascripts/workers/search.f8cc74c7.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../assets/javascripts/bundle.88dd0f4e.min.js"></script>
+      <script src="../../assets/javascripts/bundle.60a45f97.min.js"></script>
 
 
   </body>

assets/ORN-Workshop/presentation/index.html

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       <link rel="icon" href="../../nipreps_brain.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.49">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.50">
 
 
 
         <title>Presentation - NiPreps</title>
 
 
 
-      <link rel="stylesheet" href="../../stylesheets/main.6f8fc17f.min.css">
+      <link rel="stylesheet" href="../../stylesheets/main.a40c8224.min.css">
 
 
 
@@ -1586,10 +1586,10 @@ <h2 id="questions">Questions?<a class="headerlink" href="#questions" title="Perm
     </div>
 
 
-    <script id="__config" type="application/json">{"base": "../../..", "features": ["content.tabs.link"], "search": "../../javascripts/workers/search.6ce7567c.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
+    <script id="__config" type="application/json">{"base": "../../..", "features": ["content.tabs.link"], "search": "../../javascripts/workers/search.f8cc74c7.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../javascripts/bundle.88dd0f4e.min.js"></script>
+      <script src="../../javascripts/bundle.60a45f97.min.js"></script>
 
 
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assets/bhd2020/presentation/index.html

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       <link rel="icon" href="../../nipreps_brain.png">
-      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.49">
+      <meta name="generator" content="mkdocs-1.6.1, mkdocs-material-9.5.50">
 
 
 
         <title>Presentation - NiPreps</title>
 
 
 
-      <link rel="stylesheet" href="../../stylesheets/main.6f8fc17f.min.css">
+      <link rel="stylesheet" href="../../stylesheets/main.a40c8224.min.css">
 
 
 
@@ -1709,10 +1709,10 @@ <h2 id="questions">Questions?<a class="headerlink" href="#questions" title="Perm
     </div>
 
 
-    <script id="__config" type="application/json">{"base": "../../..", "features": ["content.tabs.link"], "search": "../../javascripts/workers/search.6ce7567c.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
+    <script id="__config" type="application/json">{"base": "../../..", "features": ["content.tabs.link"], "search": "../../javascripts/workers/search.f8cc74c7.min.js", "translations": {"clipboard.copied": "Copied to clipboard", "clipboard.copy": "Copy to clipboard", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.placeholder": "Type to start searching", "search.result.term.missing": "Missing", "select.version": "Select version"}}</script>
 
 
-      <script src="../../javascripts/bundle.88dd0f4e.min.js"></script>
+      <script src="../../javascripts/bundle.60a45f97.min.js"></script>
 
 
   </body>