fix: try a less generous threshold (0.15) for binarization

oesteban · oesteban · commit 2af5e715f5cb · 2020-06-02T08:50:49.000-07:00
diff --git a/niworkflows/func/util.py b/niworkflows/func/util.py
@@ -399,7 +399,7 @@ def init_enhance_and_skullstrip_bold_wf(
             ),
             name="map_brainmask",
         )
-        binarize_mask = pe.Node(Binarize(thresh_low=0.5), name="binarize_mask")
+        binarize_mask = pe.Node(Binarize(thresh_low=0.15), name="binarize_mask")
 
         # fmt: off
         workflow.connect([

Original file line number	Diff line number	Diff line change
`@@ -399,7 +399,7 @@ def init_enhance_and_skullstrip_bold_wf(`
`399`	`399`	`),`
`400`	`400`	`name="map_brainmask",`
`401`	`401`	`)`
`402`		`- binarize_mask = pe.Node(Binarize(thresh_low=0.5), name="binarize_mask")`
	`402`	`+ binarize_mask = pe.Node(Binarize(thresh_low=0.15), name="binarize_mask")`
`403`	`403`
`404`	`404`	`# fmt: off`
`405`	`405`	`workflow.connect([`