1.0.0

Release Notes

The first stable release of NIWorkflows.

CHANGES

• CI: Drop setup.py install/develop installs (#428) @effigies
• DOC: Maintenance of the documentation building (#429) @oesteban
• DOC: Generate versioned documentation of the API (#416) @rwblair
• ENH: Add copy_header inputs to some ANTs interfaces (#401) @oesteban
• ENH: Remove the data getters/utils modules (#427) @oesteban
• ENH: Move nilearn interfaces over from fMRIPrep (#414) @oesteban
• ENH: Reports use the default template from niworkflows, allowing overwrite (#419) @oesteban
• FIX: Update all SpatialImage.get_data -> get_fdata (#426) @oesteban
• MAINT: Update .gitignore and .dockerignore (#420) @oesteban
• MAINT: use scikit-image LTS for earlier python versions (#418) @mgxd
• MAINT: Pin nipype>=1.3.1, remove link dependencies from setup.cfg @oesteban

1.0.0rc2

rel(1.0.0): Update CHANGES [skip ci]

1.0.0rc1

fix(circleci): fix released current branch

0.10.4

Release Notes

Patch release with a few small bug fixes and improvements.

CHANGES

• FIX: Remove unused, undocumented output from the bold_reference workflow (#409) @oesteban
• FIX: Do not validate built paths (#405) @effigies
• FIX: Ensure that length of indices matches length of values (#397) @rciric
• ENH: Add a new Binarize interface using nibabel (#402) @oesteban
• ENH: Enable BIDSFreeSurferDir to take an absolute path as a subjects directory (#398) @effigies
• TEST: Separate LTA length fixing and add doctest (#403) @davhunt

0.10.3

Release Notes

Patch release with several bugfixes and two improvements on how NIfTI files were
handled. With thanks to David Hunt and Ursula Tooley for contributions.

CHANGES

• ENH: Memory optimized header rewriting (#386) @effigies
• ENH: Warn about copying sform to qform only if qform changes (#365) @utooley
• FIX: Nonpositive values entered to N4 when calculating BOLDrefs (#389) @oesteban
• FIX: Retain newlines in corrected LTA files (#391) @davhunt
• FIX: Handle singleton decompositions (#383) @rciric
• FIX: Revision of previous PR #337 / MELODIC did not converge (#381) @oesteban
• MAINT:Confound metadata maintenance (#382) @rciric
• TEST: Skip tests with non-Python dependencies when missing (#387) @effigies

0.10.3rc1

rel(0.10.2): Update CHANGES [skip ci]

0.10.2

Release Notes

Patch release culminating the migration of workflows from fMRIPrep.

CHANGES

• TST: Bring EPI brain extraction tests from fMRIPrep (#380) @oesteban

0.10.1

Release Notes

Patch release with bug fixes and pinning the latest stable release of the TemplateFlow client.

CHANGES

• PIN: latest templateflow client (0.4.1) @oesteban
• FIX: Load file with mmap=False when modifying on-disk dtype (#378) @effigies
• FIX: Require scikit-learn because nilearn does not (#376) @effigies

0.10.0

Release Notes

Minor release to allow dependent tools to upgrade to PyBIDS 0.9 series (minimum 0.9.2).
We've also moved to a setup.cfg-based setup to standardize configuration.

CHANGES

• MAINT: Use PyBIDS 0.9.2+ (#369) @effigies
• MAINT: Switch to a setup.cfg-based setup (#375) @effigies

0.9.6

Release Notes

Minor improvements to support some of the requirements generated during the development of fMRIPrep-1.4.1.

CHANGES

• ENH: Improvements to RobustMNINormalization (#368) @oesteban
• RF: Miscellaneous improvements to allow a multiplicity of templates and specs (#366) @oesteban