Merge pull request #63 from nipreps/maint/gha-docker

MNT: Add GHA for Docker build

Author: effigies

.github/workflows/docker.yml

@@ -0,0 +1,64 @@
+name: Docker build
+
+on:
+  workflow_dispatch:
+  push:
+    branches: [ "master", "main", "maint/*", "gha-docker-build" ]
+    tags: "*"
+  pull_request:
+    branches: [ "master", "main", "maint/*" ]
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+env:
+  REGISTRY: ghcr.io
+  IMAGE_NAME: ${{ github.repository }}
+  FORCE_COLOR: true
+
+jobs:
+  build-container:
+    runs-on: docker
+    permissions:
+      contents: read
+      packages: write
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v5
+        with:
+          fetch-depth: 200
+          fetch-tags: true
+
+      - name: Setup Docker buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Log into registry ${{ env.REGISTRY }}
+        if: github.event_name != 'pull_request'
+        uses: docker/login-action@v3
+        with:
+          registry: ${{ env.REGISTRY }}
+          username: ${{ github.actor }}
+          password: ${{ secrets.GITHUB_TOKEN }}
+
+      - name: Extract Docker metadata
+        id: meta
+        uses: docker/metadata-action@v5
+        with:
+          images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}
+
+      - name: Build and push Docker image
+        uses: docker/build-push-action@v6
+        with:
+          context: .
+          push: ${{ github.event_name != 'pull_request' }}
+          tags: ${{ steps.meta.outputs.tags }}
+          labels: ${{ steps.meta.outputs.labels }}
+          platforms: linux/amd64
+          cache-from: |
+            type=registry,ref=${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}:master
+            type=registry,ref=${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}:${{ env.TARGET_BRANCH }}
+            type=registry,ref=${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}:${{ steps.meta.outputs.tags[0] }}
+          cache-to: type=inline
+        env:
+          TARGET_BRANCH: ${{ github.base_ref || github.ref_name }}

Dockerfile

@@ -51,10 +51,10 @@ RUN apt-get update && \
     apt-get clean && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
 
 # FreeSurfer 7.4.1
-FROM downloader AS freesurfer
-COPY docker/files/freesurfer7.4.1-exclude.txt /usr/local/etc/freesurfer7.4.1-exclude.txt
-RUN curl -sSL https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.4.1/freesurfer-linux-ubuntu22_amd64-7.4.1.tar.gz \
-     | tar zxv --no-same-owner -C /opt --exclude-from=/usr/local/etc/freesurfer7.4.1-exclude.txt
+# FROM downloader AS freesurfer
+# COPY docker/files/freesurfer7.4.1-exclude.txt /usr/local/etc/freesurfer7.4.1-exclude.txt
+# RUN curl -sSL https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.4.1/freesurfer-linux-ubuntu22_amd64-7.4.1.tar.gz \
+#      | tar zxv --no-same-owner -C /opt --exclude-from=/usr/local/etc/freesurfer7.4.1-exclude.txt
 
 # AFNI
 FROM downloader AS afni
@@ -173,7 +173,7 @@ RUN apt-get update -qq \
     && ldconfig
 
 # Install files from stages
-COPY --from=freesurfer /opt/freesurfer /opt/freesurfer
+COPY --from=freesurfer/freesurfer:7.4.1 /usr/local/freesurfer /opt/freesurfer
 COPY --from=afni /opt/afni-latest /opt/afni-latest
 COPY --from=petpvc /usr/local /usr/local