Change desc-roi to desc-cortex.

Author: tsalo

.circleci/ds005_outputs.txt

@@ -22,8 +22,8 @@ smriprep/sub-01/anat/sub-01_dseg.nii.gz
 smriprep/sub-01/anat/sub-01_from-fsnative_to-T1w_mode-image_xfm.txt
 smriprep/sub-01/anat/sub-01_from-T1w_to-fsnative_mode-image_xfm.txt
 smriprep/sub-01/anat/sub-01_hemi-L_curv.shape.gii
-smriprep/sub-01/anat/sub-01_hemi-L_desc-roi_mask.json
-smriprep/sub-01/anat/sub-01_hemi-L_desc-roi_mask.label.gii
+smriprep/sub-01/anat/sub-01_hemi-L_desc-cortex_mask.json
+smriprep/sub-01/anat/sub-01_hemi-L_desc-cortex_mask.label.gii
 smriprep/sub-01/anat/sub-01_hemi-L_inflated.surf.gii
 smriprep/sub-01/anat/sub-01_hemi-L_midthickness.surf.gii
 smriprep/sub-01/anat/sub-01_hemi-L_pial.surf.gii
@@ -38,8 +38,8 @@ smriprep/sub-01/anat/sub-01_hemi-L_sulc.shape.gii
 smriprep/sub-01/anat/sub-01_hemi-L_thickness.shape.gii
 smriprep/sub-01/anat/sub-01_hemi-L_white.surf.gii
 smriprep/sub-01/anat/sub-01_hemi-R_curv.shape.gii
-smriprep/sub-01/anat/sub-01_hemi-R_desc-roi_mask.json
-smriprep/sub-01/anat/sub-01_hemi-R_desc-roi_mask.label.gii
+smriprep/sub-01/anat/sub-01_hemi-R_desc-cortex_mask.json
+smriprep/sub-01/anat/sub-01_hemi-R_desc-cortex_mask.label.gii
 smriprep/sub-01/anat/sub-01_hemi-R_inflated.surf.gii
 smriprep/sub-01/anat/sub-01_hemi-R_midthickness.surf.gii
 smriprep/sub-01/anat/sub-01_hemi-R_pial.surf.gii

src/smriprep/workflows/anatomical.py

@@ -1389,7 +1389,7 @@ def init_anat_fit_wf(
             ds_cortex_mask_wf = init_ds_mask_wf(
                 bids_root=bids_root,
                 output_dir=output_dir,
-                mask_type='roi',
+                mask_type='cortex',
                 name=f'ds_cortex_mask_wf_{hemi}',
                 extra_entities={'extension': '.label.gii', 'hemi': hemi},
             )

src/smriprep/workflows/outputs.py

@@ -325,7 +325,7 @@ def init_ds_mask_wf(
     *,
     bids_root: str,
     output_dir: str,
-    mask_type: ty.Literal['brain', 'roi', 'ribbon'],
+    mask_type: ty.Literal['brain', 'roi', 'ribbon', 'cortex'],
     extra_entities: dict | None = None,
     name='ds_mask_wf',
 ):