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Merge pull request #153 from dartmouth-pbs/merge-enh-dbic2
RF: minors -- "ls" should print, and comparator would use just heuristic name not path
2 parents 9c62046 + 9de89ae commit 2c7778c

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heudiconv/cli/run.py

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Original file line numberDiff line numberDiff line change
@@ -66,7 +66,7 @@ def process_extra_commands(outdir, args):
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study_sessions = get_study_sessions(
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args.dicom_dir_template, [f], heuristic, outdir,
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args.session, args.subjs, grouping=args.grouping)
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# print(f)
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print(f)
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for study_session, sequences in study_sessions.items():
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suf = ''
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if heuristic_ls:

utils/test-compare-two-versions.sh

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -30,11 +30,11 @@ function run() {
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# just do full conversion
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echo "Running $whichheudiconv with log in $out.log"
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$RUN heudiconv --random-seed 1 -f $heudiconvdir/heuristics/reproin.py -c dcm2niix -o $out --datalad --bids "$@" >| $out.log 2>&1
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$RUN heudiconv --random-seed 1 -c dcm2niix -o $out --datalad --bids "$@" >| $out.log 2>&1
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}
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run heudiconv rolando "$@"
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run heudiconv-master master --files "$@"
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run heudiconv rolando -f heudiconv/heuristics/dbic_bids.py "$@"
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run heudiconv-master master -f reproin --files "$@"
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cd $outdir
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#git remote add rolando "$outdir/rolando"

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