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Merge pull request #274 from mgxd/fix/netbase
DKR: improve datalad support
2 parents f8cca56 + 54e0808 commit 3ab6df7

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Dockerfile

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# Generated by Neurodocker version 0.4.1-28-g83dbc15
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# Timestamp: 2018-11-01 22:00:14 UTC
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# Timestamp: 2018-11-13 15:14:11 UTC
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#
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# Thank you for using Neurodocker. If you discover any issues
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# or ways to improve this software, please submit an issue or
@@ -70,6 +70,7 @@ RUN apt-get update -qq \
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liblzma-dev \
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libc-dev \
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git-annex-standalone \
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netbase \
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&& apt-get clean \
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&& rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
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@@ -125,7 +126,8 @@ RUN echo '{ \
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\n "pigz", \
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\n "liblzma-dev", \
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\n "libc-dev", \
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\n "git-annex-standalone" \
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\n "git-annex-standalone", \
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\n "netbase" \
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\n ] \
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\n ], \
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\n [ \

utils/gen-docker-image.sh

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docker run --rm $image generate docker -b neurodebian:stretch -p apt \
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--dcm2niix version=v1.0.20180622 method=source \
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--install git gcc pigz liblzma-dev libc-dev git-annex-standalone \
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--install git gcc pigz liblzma-dev libc-dev git-annex-standalone netbase \
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--copy . /src/heudiconv \
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--miniconda use_env=base conda_install="python=3.6 traits>=4.6.0 scipy numpy nomkl" \
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pip_install="/src/heudiconv[all]" \

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