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lines changed Original file line number Diff line number Diff line change @@ -10,4 +10,4 @@ API Reference
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api/dicoms
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api/parser
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api/queue
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- api/util
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+ api/utils
Original file line number Diff line number Diff line change @@ -41,7 +41,9 @@ The following example uses SLURM and Singularity to submit every subjects'
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DICOMs as an independent ``heudiconv `` execution.
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The first script aggregates the DICOM directories and submits them to
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- ``run_heudiconv.sh `` with SLURM as a job array.::
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+ ``run_heudiconv.sh `` with SLURM as a job array.
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+
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+ .. code :: shell
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#! /bin/bash
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@@ -60,7 +62,9 @@ The first script aggregates the DICOM directories and submits them to
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The second script processes a DICOM directory with ``heudiconv `` using the built-in
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- `reproin ` heuristic.::
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+ `reproin ` heuristic.
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+
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+ .. code :: shell
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#! /bin/bash
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set -eu
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