Merge pull request #94 from mgxd/fix/make

fix: compatible with mac install

Author: satra

Makefile

@@ -6,8 +6,8 @@ install:
 	mkdir -p $(DESTDIR)$(PREFIX)/share/heudiconv/heuristics
 	mkdir -p $(DESTDIR)$(PREFIX)/share/doc/heudiconv/examples/heuristics
 	mkdir -p $(DESTDIR)$(PREFIX)/bin
-	install -t $(DESTDIR)$(PREFIX)/bin bin/heudiconv
-	install -m 644 -t $(DESTDIR)$(PREFIX)/share/heudiconv/heuristics heuristics/*
+	install bin/heudiconv $(DESTDIR)$(PREFIX)/bin
+	install -m 644 heuristics/* $(DESTDIR)$(PREFIX)/share/heudiconv/heuristics
 
 uninstall:
 	rm -f $(DESTDIR)$(PREFIX)/bin/heudiconv

bin/heudiconv

@@ -750,7 +750,7 @@ def get_dicom_series_time(dicom_list):
     import calendar
     import dicom as dcm
 
-    dcm = dcm.read_file(dicom_list[0], stop_before_pixels=True)
+    dcm = dcm.read_file(dicom_list[0], stop_before_pixels=True, force=True)
     dcm_date = dcm.SeriesDate  # YYYYMMDD
     dcm_time = dcm.SeriesTime  # HHMMSS.MICROSEC
     dicom_time_str = dcm_date + dcm_time.split('.', 1)[0]  # YYYYMMDDHHMMSS
@@ -975,7 +975,7 @@ def get_formatted_scans_key_row(item):
 
     """
     dcm_fn = item[-1][0]
-    mw = ds.wrapper_from_data(dcm.read_file(dcm_fn, stop_before_pixels=True))
+    mw = ds.wrapper_from_data(dcm.read_file(dcm_fn, stop_before_pixels=True, force=True))
     # we need to store filenames and acquisition times
     # parse date and time and get it into isoformat
     date = mw.dcm_data.ContentDate