[DATALAD RUNCMD] isort the gitrepo we modified

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "python3 -m isort -m3 --fgw 2 --tc {outputs}",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [
  "heudiconv/bids/*py",
  "heudiconv/bids/tests/*py"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

Author: yarikoptic

heudiconv/bids/schema.py

@@ -1,11 +1,11 @@
-from pathlib import Path
+import logging
 import re
+from pathlib import Path
+
 import yaml
 
 from heudiconv.utils import remove_prefix
 
-import logging
-
 lgr = logging.getLogger(__name__)
 
 

heudiconv/bids/tests/test_utils.py

@@ -1,52 +1,50 @@
 """Test functions of heudiconv.bids.utils module.
 """
 
-import re
 import os
 import os.path as op
-from pathlib import Path
-from random import (random,
-                    choice,
-                    seed
-                    )
-from datetime import (datetime,
-                      timedelta,
-                      )
-from collections import (OrderedDict,
-                         )
+import re
+import string
+from collections import OrderedDict
+from datetime import (
+    datetime,
+    timedelta,
+)
 from glob import glob
+from pathlib import Path
+from random import (
+    choice,
+    random,
+    seed,
+)
 
 import nibabel
-import string
+import pytest
 from numpy import testing as np_testing
 
+from heudiconv.tests.utils import TESTS_DATA_PATH
 from heudiconv.utils import (
-    load_json,
-    save_json,
     create_tree,
+    load_json,
     remove_suffix,
+    save_json,
 )
 
 from .. import (
-    maybe_na,
-    treat_age,
-    find_fmap_groups,
-    populate_intended_for,
-    get_shim_setting,
-    get_key_info_for_fmap_assignment,
-    find_compatible_fmaps_for_run,
-    find_compatible_fmaps_for_session,
-    select_fmap_from_compatible_groups,
     SHIM_KEY,
     AllowedCriteriaForFmapAssignment,
     KeyInfoForForce,
+    find_compatible_fmaps_for_run,
+    find_compatible_fmaps_for_session,
+    find_fmap_groups,
+    get_key_info_for_fmap_assignment,
+    get_shim_setting,
+    maybe_na,
+    populate_intended_for,
+    select_fmap_from_compatible_groups,
+    treat_age,
 )
 
-from heudiconv.tests.utils import (
-    TESTS_DATA_PATH,
-)
-
-import pytest
 
 def gen_rand_label(label_size, label_seed, seed_stdout=True):
     seed(label_seed)

heudiconv/bids/utils.py

@@ -1,38 +1,36 @@
 """Handle BIDS specific operations"""
 
+import csv
+import errno
 import hashlib
+import logging
 import os
 import os.path as op
-import logging
-import numpy as np
 import re
 from collections import OrderedDict
 from datetime import datetime
-import csv
-from random import sample
 from glob import glob
-import errno
+from random import sample
 
-from ..external.pydicom import dcm
+import numpy as np
 
+from .. import __version__
+from ..external.pydicom import dcm
 from ..parser import find_files
 from ..utils import (
-    load_json,
-    save_json,
     create_file_if_missing,
-    json_dumps,
-    update_json,
-    set_readonly,
-    is_readonly,
     get_datetime,
-    remove_suffix,
+    is_readonly,
+    json_dumps,
+    load_json,
     remove_prefix,
+    remove_suffix,
+    save_json,
+    set_readonly,
+    update_json,
 )
-from .. import __version__
-
 from .schema import BIDSFile
 
-
 lgr = logging.getLogger(__name__)
 
 # Fields to be populated in _scans files. Order matters