Merge pull request #605 from dbic/release-me

DOC: codespell fix a few typos in code comments

Author: yarikoptic

heudiconv/heuristics/multires_7Tbold.py

@@ -27,7 +27,7 @@ def extract_moco_params(basename, outypes, dicoms):
     dcm_times = [(d,
                   float(dcm_read(d, stop_before_pixels=True).AcquisitionTime))
                     for d in dicoms]
-    # store MoCo info from image comments sorted by acqusition time
+    # store MoCo info from image comments sorted by acquisition time
     moco = ['\t'.join(
         [str(float(i)) for i in dcm_read(fn, stop_before_pixels=True).ImageComments.split()[1].split(',')])
                 for fn, t in sorted(dcm_times, key=lambda x: x[1])]

heudiconv/tests/test_heuristics.py

@@ -45,7 +45,7 @@ def test_smoke_convertall(tmpdir):
 @pytest.mark.parametrize('heuristic', ['reproin', 'convertall'])
 @pytest.mark.parametrize(
     'invocation', [
-        "--files %s" % TESTS_DATA_PATH,    # our new way with automated groupping
+        "--files %s" % TESTS_DATA_PATH,    # our new way with automated grouping
         "-d %s/{subject}/* -s 01-fmap_acq-3mm" % TESTS_DATA_PATH # "old" way specifying subject
         # should produce the same results
     ])
@@ -106,7 +106,7 @@ def test_reproin_largely_smoke(tmpdir, heuristic, invocation):
 
 @pytest.mark.parametrize(
     'invocation', [
-        "--files %s" % TESTS_DATA_PATH,    # our new way with automated groupping
+        "--files %s" % TESTS_DATA_PATH,    # our new way with automated grouping
     ])
 def test_scans_keys_reproin(tmpdir, invocation):
     args = "-f reproin -c dcm2niix -o %s -b " % (tmpdir)

heudiconv/tests/test_queue.py

@@ -10,7 +10,7 @@
 @pytest.mark.skipif(bool(which("sbatch")), reason="skip a real slurm call")
 @pytest.mark.parametrize(
     'invocation', [
-        "--files %s/01-fmap_acq-3mm" % TESTS_DATA_PATH,    # our new way with automated groupping
+        "--files %s/01-fmap_acq-3mm" % TESTS_DATA_PATH,    # our new way with automated grouping
         "-d %s/{subject}/* -s 01-fmap_acq-3mm" % TESTS_DATA_PATH # "old" way specifying subject
     ])
 def test_queue_no_slurm(tmpdir, invocation):