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README.rst

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@@ -59,7 +59,7 @@ To run the Mindboggle jupyter notebook tutorial, first install the Mindboggle
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Docker container (see below) and enter the bash shell of the container
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from your $HOST (e.g., /Users/arno)::
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docker run --rm -ti -v $HOST:/home/jovyan/work -p 8888:8888 --entrypoint /bin/bash nipy/mindboggle
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docker run --rm -ti -v $HOST:/home/jovyan/work -p 8888:8888 --entrypoint=/neurodocker/startup.sh nipy/mindboggle
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Then run the notebook from within the container::
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@@ -84,11 +84,11 @@ terminal window)::
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docker pull nipy/mindboggle
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*Note 1: This contains FreeSurfer, ANTs, and Mindboggle, so it is currently
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*Note 1:* This contains FreeSurfer, ANTs, and Mindboggle, so it is currently
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over 6GB.*
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*Note 2: You may need to increase memory allocated by Docker to at least 5GB.
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For example: By default, Docker for `Mac is set to use 2 GB runtime memory <https://docs.docker.com/docker-for-mac/>`_.*
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*Note 2:* You may need to increase memory allocated by Docker to at least 5GB.
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For example: By default, Docker for `Mac is set to use 2 GB runtime memory <https://docs.docker.com/docker-for-mac/>`_.
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3. Recommended: download sample data. To try out the ``mindboggle`` examples
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below, download and unzip the directory of example input data

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