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Joerg StadlerJoerg Stadler
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typo in nipype/workflows/dmri/fsl/epi.py
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nipype/workflows/dmri/fsl/epi.py

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@@ -631,7 +631,7 @@ def create_epidewarp_pipeline(name='epidewarp', fieldmap_registration=False):
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# fugue -i %s -w %s --loadshift=%s --mask=%s % ( mag_name, magfw_name,
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# vsmmag_name, mask_name ), log ) # Forward Map
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vsm_fwd = pe.Node(fsl.FUGUE(
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save_warped=True), name='vsm_fwd')
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forward_warping=True), name='vsm_fwd')
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vsm_reg = pe.Node(fsl.FLIRT(bins=256, cost='corratio', dof=6, interp='spline', searchr_x=[
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-10, 10], searchr_y=[-10, 10], searchr_z=[-10, 10]), name='vsm_registration')
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# 'flirt -in %s -ref %s -out %s -init %s -applyxfm' % ( vsmmag_name, ref_epi, vsmmag_name, magfw_mat_out )

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