27
27
FORCE_SPMMCR : 1
28
28
FSL_COURSE_DATA : " $HOME/examples/fsl_course_data"
29
29
FSLDIR : " $HOME/fsl/"
30
- PATH:"$HOME/fsl/bin:$PATH"
31
- LD_LIBRARY_PATH:'$HOME/fsl/lib FSLOUTPUTTYPE="NIFTI_GZ"'
30
+ PATH : " $HOME/fsl/bin:$PATH"
31
+ LD_LIBRARY_PATH : " $HOME/fsl/lib"
32
+ FSLOUTPUTTYPE : " NIFTI_GZ"
32
33
timeout : 2600
33
34
- set -o pipefail && cd doc && make html 2>&1 | tee ~/log.txt
34
35
- cat ~/log.txt && if grep -q "ERROR" ~/log.txt; then false; else true; fi
@@ -38,38 +39,43 @@ test:
38
39
SPMMCRCMD : " $HOME/spm12/run_spm12.sh $HOME/mcr/v85/ script"
39
40
FORCE_SPMMCR : 1
40
41
FSLDIR : " $HOME/fsl/"
41
- PATH:"$HOME/fsl/bin:$PATH"
42
- LD_LIBRARY_PATH:'$HOME/fsl/lib FSLOUTPUTTYPE="NIFTI_GZ"'
42
+ PATH : " $HOME/fsl/bin:$PATH"
43
+ LD_LIBRARY_PATH : " $HOME/fsl/lib"
44
+ FSLOUTPUTTYPE : " NIFTI_GZ"
43
45
timeout : 1600
44
46
- python ~/nipype/tools/run_examples.py fmri_fsl_feeds Linear l1pipeline :
45
47
pwd : ../examples
46
48
environment :
47
49
FSLDIR : " $HOME/fsl/"
48
- PATH:"$HOME/fsl/bin:$PATH"
49
- LD_LIBRARY_PATH:'$HOME/fsl/lib FSLOUTPUTTYPE="NIFTI_GZ"'
50
+ PATH : " $HOME/fsl/bin:$PATH"
51
+ LD_LIBRARY_PATH : " $HOME/fsl/lib"
52
+ FSLOUTPUTTYPE : " NIFTI_GZ"
50
53
- python ~/nipype/tools/run_examples.py fmri_spm_dartel Linear level1 l2pipeline :
51
54
pwd : ../examples
52
55
environment :
53
56
SPMMCRCMD : " $HOME/spm12/run_spm12.sh $HOME/mcr/v85/ script"
54
57
FORCE_SPMMCR : 1
55
58
FSLDIR : " $HOME/fsl/"
56
- PATH:"$HOME/fsl/bin:$PATH"
57
- LD_LIBRARY_PATH:'$HOME/fsl/lib FSLOUTPUTTYPE="NIFTI_GZ"'
59
+ PATH : " $HOME/fsl/bin:$PATH"
60
+ LD_LIBRARY_PATH : " $HOME/fsl/lib"
61
+ FSLOUTPUTTYPE : " NIFTI_GZ"
58
62
timeout : 1600
59
63
- python ~/nipype/tools/run_examples.py fmri_fsl_reuse Linear level1_workflow :
60
64
pwd : ../examples
61
65
environment :
62
66
FSLDIR : " $HOME/fsl/"
63
- PATH:"$HOME/fsl/bin:$PATH"
64
- LD_LIBRARY_PATH:'$HOME/fsl/lib FSLOUTPUTTYPE="NIFTI_GZ"'
67
+ PATH : " $HOME/fsl/bin:$PATH"
68
+ LD_LIBRARY_PATH : " $HOME/fsl/lib"
69
+ FSLOUTPUTTYPE : " NIFTI_GZ"
65
70
- python ~/nipype/tools/run_examples.py fmri_spm_nested Linear level1 l2pipeline :
66
71
pwd : ../examples
67
72
environment :
68
73
SPMMCRCMD : " $HOME/spm12/run_spm12.sh $HOME/mcr/v85/ script"
69
74
FORCE_SPMMCR : 1
70
75
FSLDIR : " $HOME/fsl/"
71
- PATH:"$HOME/fsl/bin:$PATH"
72
- LD_LIBRARY_PATH:'$HOME/fsl/lib FSLOUTPUTTYPE="NIFTI_GZ"'
76
+ PATH : " $HOME/fsl/bin:$PATH"
77
+ LD_LIBRARY_PATH : " $HOME/fsl/lib"
78
+ FSLOUTPUTTYPE : " NIFTI_GZ"
73
79
74
80
general :
75
81
artifacts :
0 commit comments