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Commit 05e4ae9

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bpinsard
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fix fugue for not necessarly wanted output
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nipype/interfaces/fsl/preprocess.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1163,7 +1163,7 @@ class FUGUEInputSpec(FSLCommandInputSpec):
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forward_warping = traits.Bool(
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False, usedefault=True,
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desc='apply forward warping instead of unwarping')
1166-
warped_file = File(argstr='--warp=%s', genfile=True,
1166+
warped_file = File(argstr='--warp=%s',
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desc='apply forward warping and save as filename',
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hash_files=False)
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phasemap_file = File(exists=True, argstr='--phasemap=%s',
@@ -1181,7 +1181,7 @@ class FUGUEInputSpec(FSLCommandInputSpec):
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save_shift = traits.Bool(desc='output pixel shift volume')
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shift_out_file = traits.File(argstr='--saveshift=%s', genfile=True,
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shift_out_file = traits.File(argstr='--saveshift=%s',
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desc='filename for saving pixel shift volume', hash_files=False)
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shift_in_file = File(exists=True, argstr='--loadshift=%s',

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