@@ -401,45 +401,39 @@ class GTMPVCInputSpec(FSTraitedSpec):
401
401
class GTMPVCOutputSpec (TraitedSpec ):
402
402
403
403
pvc_dir = Directory (exists = True , desc = "output directory" )
404
- ref_file = File (exists = True , desc = "Reference TAC in .dat" )
405
- hb_nifti = File (exists = True , desc = "High-binding TAC in nifti" )
406
- hb_dat = File (exists = True , desc = "High-binding TAC in .dat" )
407
- nopvc_file = File (exists = True , desc = "TACs for all regions with no PVC" )
408
- gtm_file = File (exists = True , desc = "TACs for all regions with GTM PVC" )
409
- gtm_stats = File (exists = True , desc = "Statistics for the GTM PVC" )
410
- input_file = File (exists = True , desc = "4D PET file in native volume space" )
411
- reg_pet2anat = File (exists = True , desc = "Registration file to go from PET to anat" )
404
+ ref_file = File (desc = "Reference TAC in .dat" )
405
+ hb_nifti = File (desc = "High-binding TAC in nifti" )
406
+ hb_dat = File (desc = "High-binding TAC in .dat" )
407
+ nopvc_file = File (desc = "TACs for all regions with no PVC" )
408
+ gtm_file = File (desc = "TACs for all regions with GTM PVC" )
409
+ gtm_stats = File (desc = "Statistics for the GTM PVC" )
410
+ input_file = File (desc = "4D PET file in native volume space" )
411
+ reg_pet2anat = File (desc = "Registration file to go from PET to anat" )
412
412
mgx_ctxgm = File (
413
- exists = True ,
414
413
desc = "Cortical GM voxel-wise values corrected using the extended Muller-Gartner method" ,
415
414
)
416
415
mgx_subctxgm = File (
417
- exists = True ,
418
416
desc = "Subcortical GM voxel-wise values corrected using the extended Muller-Gartner method" ,
419
417
)
420
418
mgx_gm = File (
421
- exists = True ,
422
419
desc = "All GM voxel-wise values corrected using the extended Muller-Gartner method" ,
423
420
)
424
421
rbv = File (
425
- exists = True , desc = "All GM voxel-wise values corrected using the RBV method"
422
+ desc = "All GM voxel-wise values corrected using the RBV method"
426
423
)
427
424
opt_params = File (
428
- exists = True , desc = "Optimal parameter estimates for the FWHM using adaptive GTM"
425
+ desc = "Optimal parameter estimates for the FWHM using adaptive GTM"
429
426
)
430
427
yhat0 = File (
431
- exists = True , desc = "4D PET file of signal estimate (yhat) after PVC (unsmoothed)"
428
+ desc = "4D PET file of signal estimate (yhat) after PVC (unsmoothed)"
432
429
)
433
430
yhat = File (
434
- exists = True ,
435
431
desc = "4D PET file of signal estimate (yhat) after PVC (smoothed with PSF)" ,
436
432
)
437
433
yhat_full_fov = File (
438
- exists = True ,
439
434
desc = "4D PET file with full FOV of signal estimate (yhat) after PVC (smoothed with PSF)" ,
440
435
)
441
436
yhat_with_noise = File (
442
- exists = True ,
443
437
desc = "4D PET file with full FOV of signal estimate (yhat) with noise after PVC (smoothed with PSF)" ,
444
438
)
445
439
0 commit comments