fix: remove prov/rdf lib and add make check fixes

Author: satra

.travis.yml

@@ -33,8 +33,6 @@ install:
 - pip install python-coveralls
 - pip install nose-cov
 - pip install -r requirements.txt  # finish remaining requirements
-- pip install https://github.com/RDFLib/rdflib/archive/master.zip
-- pip install https://github.com/trungdong/prov/archive/rdf.zip
 - python setup.py install
 script:
 - python -W once:FSL:UserWarning:nipype `which nosetests` --with-doctest --with-cov --cover-package nipype --cov-config .coveragerc --logging-level=INFO

nipype/algorithms/tests/test_auto_ErrorMap.py

@@ -360,7 +360,7 @@ def _list_outputs(self):
                 source = self.inputs.source_file
             else:
                 source = self.inputs.source_annot_file
-                
+
             # Some recon-all files don't have a proper extension (e.g. "lh.thickness")
             # so we have to account for that here
             bad_extensions = [".%s" % e for e in ["area", "mid", "pial", "avg_curv", "curv", "inflated",

nipype/algorithms/tests/test_auto_Overlap.py

@@ -6,5 +6,5 @@ python-dateutil>=1.5
 nibabel>=2.0.1
 nose>=1.2
 future==0.15.2
-simplejson
-prov>=1.4.0
+simplejson>=3.8.0
+prov>=1.4.0