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added fsl_course_data
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circle.yml

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@@ -5,13 +5,15 @@ dependencies:
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- "~/examples/feeds"
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- "~/mcr"
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- "~/spm12"
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- "~/examples/fsl_course_data"
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override:
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- pip install --upgrade pip
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- pip install -e .
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- pip install matplotlib sphinx ipython
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- if [[ ! -d ~/examples/data ]]; then wget "http://tcpdiag.dl.sourceforge.net/project/nipy/nipype/nipype-0.2/nipype-tutorial.tar.bz2"; tar jxvf nipype-tutorial.tar.bz2; mkdir ~/examples; mv nipype-tutorial/* ~/examples/; fi
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# we download this manually because CircleCI does not cache apt
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- if [[ ! -d ~/examples/feeds ]]; then wget "http://fsl.fmrib.ox.ac.uk/fsldownloads/fsl-5.0.8-feeds.tar.gz"; tar zxvf fsl-5.0.8-feeds.tar.gz; mv feeds ~/examples/; fi
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- if [[ ! -d ~/examples/fsl_course_data ]]; then wget "wget -c http://fsl.fmrib.ox.ac.uk/fslcourse/fdt1.tar.gz"; wget "wget -c http://fsl.fmrib.ox.ac.uk/fslcourse/fdt2.tar.gz"; mkdir ~/examples/fsl_course_data; tar zxvf fdt1.tar.gz -C ~/examples/fsl_course_data; tar zxvf fdt2.tar.gz -C ~/examples/fsl_course_data; fi
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- wget -O- http://neuro.debian.net/lists/trusty.us-nh.full | sudo tee /etc/apt/sources.list.d/neurodebian.sources.list
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- sudo apt-key adv --recv-keys --keyserver hkp://pgp.mit.edu:80 0xA5D32F012649A5A9
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- sudo apt-get update -y; sudo apt-get install -y fsl-core fsl-atlases

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