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satrasatra
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tst: added mipav tests
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‎nipype/interfaces/mipav/tests/test_auto_JistBrainMgdmSegmentation.py

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# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
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from nipype.testing import assert_equal
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from nipype.interfaces.mipav.developer import JistBrainMgdmSegmentation
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def test_JistBrainMgdmSegmentation_inputs():
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input_map = dict(args=dict(argstr='%s',
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),
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environ=dict(nohash=True,
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usedefault=True,
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),
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ignore_exception=dict(nohash=True,
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usedefault=True,
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),
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inAdjust=dict(argstr='--inAdjust %s',
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),
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inAtlas=dict(argstr='--inAtlas %s',
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),
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inCompute=dict(argstr='--inCompute %s',
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),
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inCurvature=dict(argstr='--inCurvature %f',
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),
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inData=dict(argstr='--inData %f',
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),
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inFLAIR=dict(argstr='--inFLAIR %s',
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),
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inMP2RAGE=dict(argstr='--inMP2RAGE %s',
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),
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inMP2RAGE2=dict(argstr='--inMP2RAGE2 %s',
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),
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inMPRAGE=dict(argstr='--inMPRAGE %s',
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),
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inMax=dict(argstr='--inMax %d',
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),
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inMin=dict(argstr='--inMin %f',
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),
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inOutput=dict(argstr='--inOutput %s',
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),
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inPV=dict(argstr='--inPV %s',
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),
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inPosterior=dict(argstr='--inPosterior %f',
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),
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inSteps=dict(argstr='--inSteps %d',
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),
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inTopology=dict(argstr='--inTopology %s',
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),
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null=dict(argstr='--null %s',
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),
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outLevelset=dict(argstr='--outLevelset %s',
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hash_files=False,
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),
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outPosterior2=dict(argstr='--outPosterior2 %s',
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hash_files=False,
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),
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outPosterior3=dict(argstr='--outPosterior3 %s',
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hash_files=False,
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),
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outSegmented=dict(argstr='--outSegmented %s',
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hash_files=False,
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),
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terminal_output=dict(mandatory=True,
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nohash=True,
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),
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xDefaultMem=dict(argstr='-xDefaultMem %d',
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),
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xMaxProcess=dict(argstr='-xMaxProcess %d',
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usedefault=True,
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),
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xPrefExt=dict(argstr='--xPrefExt %s',
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),
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)
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inputs = JistBrainMgdmSegmentation.input_spec()
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for key, metadata in input_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(inputs.traits()[key], metakey), value
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def test_JistBrainMgdmSegmentation_outputs():
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output_map = dict(outLevelset=dict(),
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outPosterior2=dict(),
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outPosterior3=dict(),
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outSegmented=dict(),
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)
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outputs = JistBrainMgdmSegmentation.output_spec()
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for key, metadata in output_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(outputs.traits()[key], metakey), value
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‎nipype/interfaces/mipav/tests/test_auto_JistBrainMp2rageDuraEstimation.py

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# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
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from nipype.testing import assert_equal
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from nipype.interfaces.mipav.developer import JistBrainMp2rageDuraEstimation
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def test_JistBrainMp2rageDuraEstimation_inputs():
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input_map = dict(args=dict(argstr='%s',
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),
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environ=dict(nohash=True,
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usedefault=True,
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),
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ignore_exception=dict(nohash=True,
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usedefault=True,
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),
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inDistance=dict(argstr='--inDistance %f',
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),
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inSecond=dict(argstr='--inSecond %s',
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),
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inSkull=dict(argstr='--inSkull %s',
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),
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inoutput=dict(argstr='--inoutput %s',
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),
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null=dict(argstr='--null %s',
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),
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outDura=dict(argstr='--outDura %s',
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hash_files=False,
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),
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terminal_output=dict(mandatory=True,
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nohash=True,
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),
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xDefaultMem=dict(argstr='-xDefaultMem %d',
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),
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xMaxProcess=dict(argstr='-xMaxProcess %d',
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usedefault=True,
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),
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xPrefExt=dict(argstr='--xPrefExt %s',
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),
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)
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inputs = JistBrainMp2rageDuraEstimation.input_spec()
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for key, metadata in input_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(inputs.traits()[key], metakey), value
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def test_JistBrainMp2rageDuraEstimation_outputs():
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output_map = dict(outDura=dict(),
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)
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outputs = JistBrainMp2rageDuraEstimation.output_spec()
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for key, metadata in output_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(outputs.traits()[key], metakey), value
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‎nipype/interfaces/mipav/tests/test_auto_JistBrainMp2rageSkullStripping.py

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# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
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from nipype.testing import assert_equal
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from nipype.interfaces.mipav.developer import JistBrainMp2rageSkullStripping
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def test_JistBrainMp2rageSkullStripping_inputs():
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input_map = dict(args=dict(argstr='%s',
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),
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environ=dict(nohash=True,
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usedefault=True,
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),
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ignore_exception=dict(nohash=True,
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usedefault=True,
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),
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inFilter=dict(argstr='--inFilter %s',
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),
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inSecond=dict(argstr='--inSecond %s',
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),
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inSkip=dict(argstr='--inSkip %s',
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),
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inT1=dict(argstr='--inT1 %s',
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),
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inT1weighted=dict(argstr='--inT1weighted %s',
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),
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null=dict(argstr='--null %s',
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),
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outBrain=dict(argstr='--outBrain %s',
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hash_files=False,
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),
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outMasked=dict(argstr='--outMasked %s',
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hash_files=False,
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),
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outMasked2=dict(argstr='--outMasked2 %s',
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hash_files=False,
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),
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outMasked3=dict(argstr='--outMasked3 %s',
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hash_files=False,
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),
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terminal_output=dict(mandatory=True,
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nohash=True,
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),
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xDefaultMem=dict(argstr='-xDefaultMem %d',
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),
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xMaxProcess=dict(argstr='-xMaxProcess %d',
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usedefault=True,
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),
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xPrefExt=dict(argstr='--xPrefExt %s',
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),
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)
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inputs = JistBrainMp2rageSkullStripping.input_spec()
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for key, metadata in input_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(inputs.traits()[key], metakey), value
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def test_JistBrainMp2rageSkullStripping_outputs():
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output_map = dict(outBrain=dict(),
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outMasked=dict(),
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outMasked2=dict(),
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outMasked3=dict(),
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)
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outputs = JistBrainMp2rageSkullStripping.output_spec()
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for key, metadata in output_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(outputs.traits()[key], metakey), value
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‎nipype/interfaces/mipav/tests/test_auto_JistBrainPartialVolumeFilter.py

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# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
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from nipype.testing import assert_equal
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from nipype.interfaces.mipav.developer import JistBrainPartialVolumeFilter
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def test_JistBrainPartialVolumeFilter_inputs():
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input_map = dict(args=dict(argstr='%s',
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),
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environ=dict(nohash=True,
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usedefault=True,
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),
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ignore_exception=dict(nohash=True,
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usedefault=True,
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),
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inInput=dict(argstr='--inInput %s',
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),
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inPV=dict(argstr='--inPV %s',
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),
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inoutput=dict(argstr='--inoutput %s',
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),
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null=dict(argstr='--null %s',
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),
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outPartial=dict(argstr='--outPartial %s',
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hash_files=False,
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),
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terminal_output=dict(mandatory=True,
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nohash=True,
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),
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xDefaultMem=dict(argstr='-xDefaultMem %d',
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),
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xMaxProcess=dict(argstr='-xMaxProcess %d',
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usedefault=True,
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),
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xPrefExt=dict(argstr='--xPrefExt %s',
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),
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)
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inputs = JistBrainPartialVolumeFilter.input_spec()
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for key, metadata in input_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(inputs.traits()[key], metakey), value
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def test_JistBrainPartialVolumeFilter_outputs():
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output_map = dict(outPartial=dict(),
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)
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outputs = JistBrainPartialVolumeFilter.output_spec()
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for key, metadata in output_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(outputs.traits()[key], metakey), value
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‎nipype/interfaces/mipav/tests/test_auto_JistCortexSurfaceMeshInflation.py

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# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
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from nipype.testing import assert_equal
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from nipype.interfaces.mipav.developer import JistCortexSurfaceMeshInflation
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def test_JistCortexSurfaceMeshInflation_inputs():
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input_map = dict(args=dict(argstr='%s',
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),
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environ=dict(nohash=True,
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usedefault=True,
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),
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ignore_exception=dict(nohash=True,
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usedefault=True,
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),
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inLevelset=dict(argstr='--inLevelset %s',
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),
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inLorentzian=dict(argstr='--inLorentzian %s',
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),
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inMax=dict(argstr='--inMax %d',
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),
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inMean=dict(argstr='--inMean %f',
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),
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inSOR=dict(argstr='--inSOR %f',
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),
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inStep=dict(argstr='--inStep %d',
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),
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inTopology=dict(argstr='--inTopology %s',
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),
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null=dict(argstr='--null %s',
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),
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outInflated=dict(argstr='--outInflated %s',
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hash_files=False,
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),
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outOriginal=dict(argstr='--outOriginal %s',
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hash_files=False,
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),
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terminal_output=dict(mandatory=True,
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nohash=True,
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),
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xDefaultMem=dict(argstr='-xDefaultMem %d',
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),
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xMaxProcess=dict(argstr='-xMaxProcess %d',
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usedefault=True,
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),
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xPrefExt=dict(argstr='--xPrefExt %s',
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),
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)
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inputs = JistCortexSurfaceMeshInflation.input_spec()
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for key, metadata in input_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(inputs.traits()[key], metakey), value
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def test_JistCortexSurfaceMeshInflation_outputs():
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output_map = dict(outInflated=dict(),
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outOriginal=dict(),
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)
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outputs = JistCortexSurfaceMeshInflation.output_spec()
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for key, metadata in output_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(outputs.traits()[key], metakey), value
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‎nipype/interfaces/mipav/tests/test_auto_JistIntensityMp2rageMasking.py

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# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
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from nipype.testing import assert_equal
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from nipype.interfaces.mipav.developer import JistIntensityMp2rageMasking
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def test_JistIntensityMp2rageMasking_inputs():
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input_map = dict(args=dict(argstr='%s',
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),
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environ=dict(nohash=True,
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usedefault=True,
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),
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ignore_exception=dict(nohash=True,
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usedefault=True,
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),
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inBackground=dict(argstr='--inBackground %s',
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),
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inMasking=dict(argstr='--inMasking %s',
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),
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inQuantitative=dict(argstr='--inQuantitative %s',
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),
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inSecond=dict(argstr='--inSecond %s',
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),
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inSkip=dict(argstr='--inSkip %s',
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),
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inT1weighted=dict(argstr='--inT1weighted %s',
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),
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null=dict(argstr='--null %s',
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),
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outMasked=dict(argstr='--outMasked %s',
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hash_files=False,
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),
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outMasked2=dict(argstr='--outMasked2 %s',
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hash_files=False,
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),
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outSignal=dict(argstr='--outSignal %s',
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hash_files=False,
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),
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outSignal2=dict(argstr='--outSignal2 %s',
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hash_files=False,
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),
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terminal_output=dict(mandatory=True,
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nohash=True,
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),
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xDefaultMem=dict(argstr='-xDefaultMem %d',
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),
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xMaxProcess=dict(argstr='-xMaxProcess %d',
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usedefault=True,
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),
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xPrefExt=dict(argstr='--xPrefExt %s',
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),
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)
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inputs = JistIntensityMp2rageMasking.input_spec()
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for key, metadata in input_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(inputs.traits()[key], metakey), value
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def test_JistIntensityMp2rageMasking_outputs():
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output_map = dict(outMasked=dict(),
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outMasked2=dict(),
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outSignal=dict(),
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outSignal2=dict(),
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)
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outputs = JistIntensityMp2rageMasking.output_spec()
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for key, metadata in output_map.items():
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for metakey, value in metadata.items():
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yield assert_equal, getattr(outputs.traits()[key], metakey), value
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