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Commit 5662935

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josephmjeeffigies
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Co-Authored-By: Chris Markiewicz <[email protected]>
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nipype/interfaces/fsl/epi.py

Lines changed: 6 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -565,8 +565,9 @@ class EddyInputSpec(FSLCommandInputSpec):
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in_topup_movpar = File(
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exists=True,
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requires=['in_topup_fieldcoef'],
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desc='Topup results file containing the movement parameters')
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desc='Topup results file containing the movement parameters (movpar.txt)')
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field = File(
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exists=True,
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argstr='--field=%s',
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desc=('Non-topup derived fieldmap scaled in Hz'))
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field_mat = File(
@@ -676,15 +677,15 @@ class EddyInputSpec(FSLCommandInputSpec):
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desc='Consider outliers among sums-of-squared differences if set',
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requires=['repol'],
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min_ver='5.0.10')
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mb = traits.Int(
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multiband_factor = traits.Int(
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argstr='--mb=%s',
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desc='Multi-band factor',
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min_ver='5.0.10')
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mb_offs = traits.Enum(
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multiband_offset = traits.Enum(
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0,
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1,
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-1,
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argstr='--mb_offs=%s',
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argstr='--mb_offs=%d',
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desc=('Multi-band offset (-1 if bottom slice removed, 1 if '
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'top slice removed'),
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requires=['mb'],
@@ -695,7 +696,7 @@ class EddyInputSpec(FSLCommandInputSpec):
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desc='Order of slice-to-vol movement model',
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requires=['use_cuda'],
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min_ver='5.0.11')
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s2v_niter = traits.Int(
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slice2vol_iterations = traits.Int(
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argstr='--s2v_niter=%s',
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desc='Number of iterations for slice-to-vol',
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requires=['mporder'],

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