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fix tests
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nipype/interfaces/afni/preprocess.py

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@@ -1729,8 +1729,8 @@ class OutlierCountOutputSpec(TraitedSpec):
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class OutlierCount(CommandLine):
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"""Calculates number of 'outliers' a 3D+time dataset, at each
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time point, and writes the results to stdout.
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"""Calculates number of 'outliers' at each time point of a
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a 3D+time dataset.
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For complete details, see the `3dToutcount Documentation
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<https://afni.nimh.nih.gov/pub/dist/doc/program_help/3dToutcount.html>`_
@@ -1742,7 +1742,7 @@ class OutlierCount(CommandLine):
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>>> toutcount = afni.OutlierCount()
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>>> toutcount.inputs.in_file = 'functional.nii'
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>>> toutcount.cmdline # doctest: +ELLIPSIS +ALLOW_UNICODE
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'3dToutcount functional.nii > functional_outliers'
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'3dToutcount functional.nii'
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>>> res = toutcount.run() # doctest: +SKIP
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"""

nipype/interfaces/fsl/utils.py

Lines changed: 1 addition & 1 deletion
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@@ -2148,7 +2148,7 @@ class WarpPointsFromStd(CommandLine):
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>>> warppoints.inputs.std_file = 'mni.nii'
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>>> warppoints.inputs.warp_file = 'warpfield.nii'
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>>> warppoints.inputs.coord_mm = True
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>>> warppoints.cmdline # doctest: +ELLIPSIS +IGNORE_UNICODE
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>>> warppoints.cmdline # doctest: +ELLIPSIS +ALLOW_UNICODE
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'std2imgcoord -mm -img T1.nii -std mni.nii -warp warpfield.nii surf.txt'
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>>> res = warppoints.run() # doctest: +SKIP
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