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lines changed Original file line number Diff line number Diff line change 12
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from .utils import *
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- def all_fmb_pipeline (name = 'hmc_sdc_ecc' ,
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- fugue_params = dict (smooth3d = 2.0 ),
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- bmap_params = dict (delta_te = 2.46e-3 ),
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- epi_params = dict (echospacing = 0.77e-3 ,
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- acc_factor = 3 ,
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- enc_dir = 'y-' )):
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+ def all_fmb_pipeline (name = 'hmc_sdc_ecc' , fugue_params = dict (smooth3d = 2.0 )):
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"""
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Builds a pipeline including three artifact corrections: head-motion
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correction (HMC), susceptibility-derived distortion correction (SDC),
@@ -62,8 +57,7 @@ def all_fmb_pipeline(name='hmc_sdc_ecc',
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name = 'bet_dwi_post' )
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hmc = hmc_pipeline ()
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- sdc = sdc_fmb (fugue_params = fugue_params , bmap_params = bmap_params ,
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- epi_params = epi_params )
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+ sdc = sdc_fmb (fugue_params = fugue_params )
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ecc = ecc_pipeline ()
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unwarp = apply_all_corrections ()
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