@@ -192,9 +192,7 @@ class DWIBiasCorrectInputSpec(MRTrix3BaseInputSpec):
192
192
mandatory = True ,
193
193
desc = "input DWI image" ,
194
194
)
195
- in_mask = File (
196
- argstr = "-mask %s" , desc = "input mask image for bias field estimation"
197
- )
195
+ in_mask = File (argstr = "-mask %s" , desc = "input mask image for bias field estimation" )
198
196
use_ants = traits .Bool (
199
197
argstr = "ants" ,
200
198
mandatory = True ,
@@ -411,9 +409,7 @@ def _list_outputs(self):
411
409
outputs = self .output_spec ().get ()
412
410
outputs ["out_file" ] = op .abspath (self .inputs .out_file )
413
411
if self .inputs .export_grad_mrtrix :
414
- outputs ["out_grad_mrtrix" ] = op .abspath (
415
- self .inputs .out_grad_mrtrix
416
- )
412
+ outputs ["out_grad_mrtrix" ] = op .abspath (self .inputs .out_grad_mrtrix )
417
413
if self .inputs .export_grad_fsl :
418
414
outputs ["out_fsl_bvec" ] = op .abspath (self .inputs .out_grad_fsl [0 ])
419
415
outputs ["out_fsl_bval" ] = op .abspath (self .inputs .out_grad_fsl [1 ])
@@ -447,15 +443,9 @@ class ResponseSDInputSpec(MRTrix3BaseInputSpec):
447
443
usedefault = True ,
448
444
desc = "output WM response text file" ,
449
445
)
450
- gm_file = File (
451
- argstr = "%s" , position = - 2 , desc = "output GM response text file"
452
- )
453
- csf_file = File (
454
- argstr = "%s" , position = - 1 , desc = "output CSF response text file"
455
- )
456
- in_mask = File (
457
- exists = True , argstr = "-mask %s" , desc = "provide initial mask image"
458
- )
446
+ gm_file = File (argstr = "%s" , position = - 2 , desc = "output GM response text file" )
447
+ csf_file = File (argstr = "%s" , position = - 1 , desc = "output CSF response text file" )
448
+ in_mask = File (exists = True , argstr = "-mask %s" , desc = "provide initial mask image" )
459
449
max_sh = InputMultiObject (
460
450
traits .Int ,
461
451
argstr = "-lmax %s" ,
0 commit comments