added auto tests

Author: Fabio Bernardoni

nipype/interfaces/spm/tests/test_auto_ApplyVDM.py

@@ -0,0 +1,73 @@
+# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
+from ..preprocess import ApplyVDM
+
+
+def test_ApplyVDM_inputs():
+    input_map = dict(
+        distortion_direction=dict(
+            field="roptions.pedir",
+            usedefault=True,
+        ),
+        in_files=dict(
+            copyfile=True,
+            field="data.scans",
+            mandatory=True,
+        ),
+        interpolation=dict(
+            field="roptions.rinterp",
+            usedefault=True,
+        ),
+        matlab_cmd=dict(),
+        mfile=dict(
+            usedefault=True,
+        ),
+        out_prefix=dict(
+            field="roptions.prefix",
+            usedefault=True,
+        ),
+        paths=dict(),
+        reslice_interp=dict(
+            field="roptions.rinterp",
+        ),
+        use_mcr=dict(),
+        use_v8struct=dict(
+            min_ver="8",
+            usedefault=True,
+        ),
+        vdmfile=dict(
+            copyfile=True,
+            extensions=None,
+            field="data.vdmfile",
+        ),
+        write_mask=dict(
+            field="roptions.mask",
+        ),
+        write_which=dict(
+            field="roptions.which",
+            maxlen=2,
+            minlen=2,
+            usedefault=True,
+        ),
+        write_wrap=dict(
+            field="roptions.wrap",
+        ),
+    )
+    inputs = ApplyVDM.input_spec()
+
+    for key, metadata in list(input_map.items()):
+        for metakey, value in list(metadata.items()):
+            assert getattr(inputs.traits()[key], metakey) == value
+
+
+def test_ApplyVDM_outputs():
+    output_map = dict(
+        mean_image=dict(
+            extensions=None,
+        ),
+        out_files=dict(),
+    )
+    outputs = ApplyVDM.output_spec()
+
+    for key, metadata in list(output_map.items()):
+        for metakey, value in list(metadata.items()):
+            assert getattr(outputs.traits()[key], metakey) == value

nipype/interfaces/spm/tests/test_auto_FieldMap.py

@@ -13,42 +13,29 @@ def test_FieldMap_inputs():
             field="subj.defaults.defaultsval.blipdir",
             mandatory=True,
         ),
-        distortion_direction=dict(
-            field="roptions.pedir",
-            usedefault=True,
-        ),
         echo_times=dict(
             field="subj.defaults.defaultsval.et",
+            mandatory=True,
         ),
         epi_file=dict(
             copyfile=False,
             extensions=None,
             field="subj.session.epi",
+            mandatory=True,
         ),
         epifm=dict(
             field="subj.defaults.defaultsval.epifm",
             usedefault=True,
         ),
-        in_files=dict(
-            copyfile=True,
-            field="data.scans",
-            mandatory=True,
-        ),
-        interpolation=dict(
-            field="roptions.rinterp",
-            usedefault=True,
-        ),
         jacobian_modulation=dict(
             field="subj.defaults.defaultsval.ajm",
             usedefault=True,
         ),
-        jobtype=dict(
-            usedefault=True,
-        ),
         magnitude_file=dict(
             copyfile=False,
             extensions=None,
             field="subj.data.presubphasemag.magnitude",
+            mandatory=True,
         ),
         mask_fwhm=dict(
             field="subj.defaults.defaultsval.mflags.fwhm",
@@ -82,10 +69,6 @@ def test_FieldMap_inputs():
             field="subj.defaults.defaultsval.mflags.nerode",
             usedefault=True,
         ),
-        out_prefix=dict(
-            field="roptions.prefix",
-            usedefault=True,
-        ),
         pad=dict(
             field="subj.defaults.defaultsval.uflags.pad",
             usedefault=True,
@@ -95,14 +78,12 @@ def test_FieldMap_inputs():
             copyfile=False,
             extensions=None,
             field="subj.data.presubphasemag.phase",
+            mandatory=True,
         ),
         reg=dict(
             field="subj.defaults.defaultsval.mflags.reg",
             usedefault=True,
         ),
-        reslice_interp=dict(
-            field="roptions.rinterp",
-        ),
         sessname=dict(
             field="subj.sessname",
             usedefault=True,
@@ -129,24 +110,6 @@ def test_FieldMap_inputs():
             min_ver="8",
             usedefault=True,
         ),
-        vdmfile=dict(
-            copyfile=True,
-            extensions=None,
-            field="data.vdmfile",
-            mandatory=True,
-        ),
-        write_mask=dict(
-            field="roptions.mask",
-        ),
-        write_which=dict(
-            field="roptions.which",
-            maxlen=2,
-            minlen=2,
-            usedefault=True,
-        ),
-        write_wrap=dict(
-            field="roptions.wrap",
-        ),
         writeunwarped=dict(
             field="subj.writeunwarped",
             usedefault=True,
@@ -165,10 +128,6 @@ def test_FieldMap_inputs():
 
 def test_FieldMap_outputs():
     output_map = dict(
-        mean_image=dict(
-            extensions=None,
-        ),
-        out_files=dict(),
         vdm=dict(
             extensions=None,
         ),