update specs

Author: oesteban

nipype/interfaces/afni/tests/test_auto_ABoverlap.py

@@ -24,13 +24,17 @@ def test_ABoverlap_inputs():
     ),
     no_automask=dict(argstr='-no_automask',
     ),
+    num_threads=dict(nohash=True,
+    usedefault=True,
+    ),
     out_file=dict(argstr=' |& tee %s',
     position=-1,
     ),
     outputtype=dict(),
     quiet=dict(argstr='-quiet',
     ),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     verb=dict(argstr='-verb',
     ),

nipype/interfaces/afni/tests/test_auto_AFNICommand.py

@@ -12,12 +12,16 @@ def test_AFNICommand_inputs():
     ignore_exception=dict(nohash=True,
     usedefault=True,
     ),
+    num_threads=dict(nohash=True,
+    usedefault=True,
+    ),
     out_file=dict(argstr='-prefix %s',
     name_source=['in_file'],
     name_template='%s_afni',
     ),
     outputtype=dict(),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     )
     inputs = AFNICommand.input_spec()

nipype/interfaces/afni/tests/test_auto_AFNICommandBase.py

@@ -12,7 +12,8 @@ def test_AFNICommandBase_inputs():
     ignore_exception=dict(nohash=True,
     usedefault=True,
     ),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     )
     inputs = AFNICommandBase.input_spec()

nipype/interfaces/afni/tests/test_auto_AFNIPythonCommand.py

@@ -12,12 +12,16 @@ def test_AFNIPythonCommand_inputs():
     ignore_exception=dict(nohash=True,
     usedefault=True,
     ),
+    num_threads=dict(nohash=True,
+    usedefault=True,
+    ),
     out_file=dict(argstr='-prefix %s',
     name_source=['in_file'],
     name_template='%s_afni',
     ),
     outputtype=dict(),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     )
     inputs = AFNIPythonCommand.input_spec()

nipype/interfaces/afni/tests/test_auto_AFNItoNIFTI.py

@@ -22,6 +22,9 @@ def test_AFNItoNIFTI_inputs():
     newid=dict(argstr='-newid',
     xor=['oldid'],
     ),
+    num_threads=dict(nohash=True,
+    usedefault=True,
+    ),
     oldid=dict(argstr='-oldid',
     xor=['newid'],
     ),
@@ -33,7 +36,8 @@ def test_AFNItoNIFTI_inputs():
     outputtype=dict(),
     pure=dict(argstr='-pure',
     ),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     )
     inputs = AFNItoNIFTI.input_spec()

nipype/interfaces/afni/tests/test_auto_AlignEpiAnatPy.py

@@ -37,7 +37,8 @@ def test_AlignEpiAnatPy_inputs():
     suffix=dict(argstr='-suffix %s',
     usedefault=True,
     ),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     tshift=dict(argstr='-tshift %s',
     usedefault=True,

nipype/interfaces/afni/tests/test_auto_Allineate.py

@@ -67,6 +67,9 @@ def test_Allineate_inputs():
     ),
     nomask=dict(argstr='-nomask',
     ),
+    num_threads=dict(nohash=True,
+    usedefault=True,
+    ),
     nwarp=dict(argstr='-nwarp %s',
     ),
     nwarp_fixdep=dict(argstr='-nwarp_fixdep%s',
@@ -101,7 +104,8 @@ def test_Allineate_inputs():
     ),
     source_mask=dict(argstr='-source_mask %s',
     ),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     two_best=dict(argstr='-twobest %d',
     ),

nipype/interfaces/afni/tests/test_auto_AutoTLRC.py

@@ -22,7 +22,8 @@ def test_AutoTLRC_inputs():
     no_ss=dict(argstr='-no_ss',
     ),
     outputtype=dict(),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     )
     inputs = AutoTLRC.input_spec()

nipype/interfaces/afni/tests/test_auto_AutoTcorrelate.py

@@ -27,14 +27,18 @@ def test_AutoTcorrelate_inputs():
     mask_source=dict(argstr='-mask_source %s',
     xor=['mask_only_targets'],
     ),
+    num_threads=dict(nohash=True,
+    usedefault=True,
+    ),
     out_file=dict(argstr='-prefix %s',
     name_source='in_file',
     name_template='%s_similarity_matrix.1D',
     ),
     outputtype=dict(),
     polort=dict(argstr='-polort %d',
     ),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     )
     inputs = AutoTcorrelate.input_spec()

nipype/interfaces/afni/tests/test_auto_Autobox.py

@@ -18,14 +18,18 @@ def test_Autobox_inputs():
     ),
     no_clustering=dict(argstr='-noclust',
     ),
+    num_threads=dict(nohash=True,
+    usedefault=True,
+    ),
     out_file=dict(argstr='-prefix %s',
     name_source='in_file',
     name_template='%s_autobox',
     ),
     outputtype=dict(),
     padding=dict(argstr='-npad %d',
     ),
-    terminal_output=dict(nohash=True,
+    terminal_output=dict(deprecated='1.0.0',
+    nohash=True,
     ),
     )
     inputs = Autobox.input_spec()