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lines changed Original file line number Diff line number Diff line change @@ -859,7 +859,7 @@ def run(self, **inputs):
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copy2subjdir (self , self .inputs .lh_white ,
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'surf' , 'lh.white' )
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copy2subjdir (self , self .inputs .rh_white ,
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- 'Surf ' , 'Rh.White ' )
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+ 'surf ' , 'rh.white ' )
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copy2subjdir (self , self .inputs .lh_pial ,
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'surf' , 'lh.pial' )
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copy2subjdir (self , self .inputs .rh_pial ,
@@ -872,8 +872,7 @@ def run(self, **inputs):
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os .path .join ('mri' , 'transforms' ),
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'talairach.xfm' )
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copy2subjdir (self , self .inputs .in_intensity , 'mri' )
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- if isdefined (self .inputs .brainmask_file ):
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- copy2subjdir (self , self .inputs .brainmask_file , 'mri' )
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+ copy2subjdir (self , self .inputs .brainmask_file , 'mri' )
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return super (SegStatsReconAll , self ).run (** inputs )
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