added mixin for backward compatability since interfaces were renamed

Author: kesshijordan

nipype/interfaces/dtitk/base.py

@@ -28,10 +28,26 @@
 from ...utils.filemanip import fname_presuffix
 from ..base import CommandLine
 from nipype.interfaces.fsl.base import Info
+import warnings
 
 LOGGER = logging.getLogger('interface')
 
 
+class DTITKRenameMixin(object):
+    def __init__(self, *args, **kwargs):
+        classes = [cls.__name__ for cls in self.__class__.mro()]
+        dep_name = classes[0]
+        rename_idx = classes.index('DTITKRenameMixin')
+        new_name = classes[rename_idx + 1]
+        warnings.warn('The {} interface has been renamed to {}\n'
+                      'Please see the documentation for DTI-TK '
+                      'interfaces, as some inputs have been '
+                      'added or renamed for clarity.'
+                      ''.format(dep_name, new_name),
+                      DeprecationWarning)
+        super(DTITKRenameMixin, self).__init__(*args, **kwargs)
+
+
 class CommandLineDtitk(CommandLine):
 
     def _gen_fname(self, basename, cwd=None, suffix=None, change_ext=True,

nipype/interfaces/dtitk/registration.py

@@ -26,7 +26,7 @@
 
 from ..base import TraitedSpec, CommandLineInputSpec, traits, File, isdefined
 from ...utils.filemanip import fname_presuffix
-from .base import CommandLineDtitk
+from .base import CommandLineDtitk, DTITKRenameMixin
 import os
 
 __docformat__ = 'restructuredtext'
@@ -444,3 +444,35 @@ def _format_arg(self, name, spec, value):
         elif name == 'interpolation':
             value = {'trilinear': 0, 'NN': 1}[value]
         return super(DiffeoScalarVol, self)._format_arg(name, spec, value)
+
+
+class RigidTask(DTITKRenameMixin, Rigid):
+    pass
+
+
+class AffineTask(DTITKRenameMixin, Affine):
+    pass
+
+
+class DiffeoTask(DTITKRenameMixin, Diffeo):
+    pass
+
+
+class ComposeXfmTask(DTITKRenameMixin, ComposeXfm):
+    pass
+
+
+class affScalarVolTask(DTITKRenameMixin, AffScalarVol):
+    pass
+
+
+class affSymTensor3DVolTask(DTITKRenameMixin, AffSymTensor3DVol):
+    pass
+
+
+class diffeoScalarVolTask(DTITKRenameMixin, DiffeoScalarVol):
+    pass
+
+
+class diffeoSymTensor3DVolTask(DTITKRenameMixin, DiffeoSymTensor3DVol):
+    pass

nipype/interfaces/dtitk/utils.py

@@ -26,7 +26,7 @@
 
 from ..base import TraitedSpec, CommandLineInputSpec, File, traits, isdefined
 from ...utils.filemanip import fname_presuffix
-from .base import CommandLineDtitk
+from .base import CommandLineDtitk, DTITKRenameMixin
 import os
 
 __docformat__ = 'restructuredtext'
@@ -303,3 +303,31 @@ class BinThresh(CommandLineDtitk):
     input_spec = BinThreshInputSpec
     output_spec = BinThreshOutputSpec
     _cmd = 'BinaryThresholdImageFilter'
+
+
+class BinThreshTASK(DTITKRenameMixin, BinThresh):
+    pass
+
+
+class SVAdjustVoxSpTask(DTITKRenameMixin, SVAdjustVoxSp):
+    pass
+
+
+class SVResampleTask(DTITKRenameMixin, SVResample):
+    pass
+
+
+class TVAdjustOriginTask(DTITKRenameMixin, TVAdjustVoxSp):
+    pass
+
+
+class TVAdjustVoxSpTask(DTITKRenameMixin, TVAdjustVoxSp):
+    pass
+
+
+class TVResampleTask(DTITKRenameMixin, TVResample):
+    pass
+
+
+class TVtoolTask(DTITKRenameMixin, TVtool):
+    pass