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lower the requirements of the bedpostx test
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-7
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2 files changed

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-7
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circle.yml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -27,7 +27,7 @@ test:
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SPMMCRCMD: "$HOME/spm12/run_spm12.sh $HOME/mcr/v85/ script"
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FORCE_SPMMCR: 1
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FSL_COURSE_DATA: "$HOME/examples/fsl_course_data"
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timeout: 1600
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timeout: 2600
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- set -o pipefail && cd doc && make html 2>&1 | tee ~/log.txt
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- cat ~/log.txt && if grep -q "ERROR" ~/log.txt; then false; else true; fi
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- . /usr/share/fsl/5.0/etc/fslconf/fsl.sh && python ~/nipype/tools/run_examples.py fmri_fsl_feeds Linear l1pipeline:

nipype/workflows/dmri/fsl/tests/test_dti.py

Lines changed: 6 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -28,10 +28,10 @@ def test_create_bedpostx_pipeline():
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nipype_bedpostx.inputs.inputnode.mask = mask_file
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nipype_bedpostx.inputs.inputnode.bvecs = bvecs_file
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nipype_bedpostx.inputs.inputnode.bvals = bvals_file
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nipype_bedpostx.inputs.xfibres.n_fibres = 2
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nipype_bedpostx.inputs.xfibres.n_fibres = 1
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nipype_bedpostx.inputs.xfibres.fudge = 1
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nipype_bedpostx.inputs.xfibres.burn_in = 1000
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nipype_bedpostx.inputs.xfibres.n_jumps = 1250
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nipype_bedpostx.inputs.xfibres.burn_in = 10
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nipype_bedpostx.inputs.xfibres.n_jumps = 25
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nipype_bedpostx.inputs.xfibres.sample_every = 25
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with warnings.catch_warnings():
@@ -42,10 +42,10 @@ def test_create_bedpostx_pipeline():
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original_bedpostx.inputs.bvecs = bvecs_file
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original_bedpostx.inputs.bvals = bvals_file
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original_bedpostx.inputs.environ['FSLPARALLEL'] = ""
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original_bedpostx.inputs.n_fibres = 2
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original_bedpostx.inputs.n_fibres = 1
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original_bedpostx.inputs.fudge = 1
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original_bedpostx.inputs.burn_in = 1000
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original_bedpostx.inputs.n_jumps = 1250
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original_bedpostx.inputs.burn_in = 10
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original_bedpostx.inputs.n_jumps = 25
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original_bedpostx.inputs.sample_every = 25
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test_f1 = pe.Node(util.AssertEqual(), name="mean_f1_test")

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