STY: black 2024.2 [ignore-rev]

Author: effigies

nipype/algorithms/modelgen.py

@@ -417,9 +417,9 @@ def _generate_standard_design(
                                 sessinfo[i]["cond"][cid]["pmod"][j]["poly"] = info.pmod[
                                     cid
                                 ].poly[j]
-                                sessinfo[i]["cond"][cid]["pmod"][j][
-                                    "param"
-                                ] = info.pmod[cid].param[j]
+                                sessinfo[i]["cond"][cid]["pmod"][j]["param"] = (
+                                    info.pmod[cid].param[j]
+                                )
 
             sessinfo[i]["regress"] = []
             if hasattr(info, "regressors") and info.regressors is not None:

nipype/algorithms/rapidart.py

@@ -584,9 +584,9 @@ def _detect_outliers_core(self, imgfile, motionfile, runidx, cwd=None):
             if displacement is not None:
                 dmap = np.zeros((x, y, z, timepoints), dtype=np.float64)
                 for i in range(timepoints):
-                    dmap[
-                        voxel_coords[0], voxel_coords[1], voxel_coords[2], i
-                    ] = displacement[i, :]
+                    dmap[voxel_coords[0], voxel_coords[1], voxel_coords[2], i] = (
+                        displacement[i, :]
+                    )
                 dimg = Nifti1Image(dmap, affine)
                 dimg.to_filename(displacementfile)
         else:

nipype/caching/memory.py

@@ -2,6 +2,7 @@
 Using nipype with persistence and lazy recomputation but without explicit
 name-steps pipeline: getting back scope in command-line based programming.
 """
+
 import os
 import hashlib
 import pickle

nipype/interfaces/ants/legacy.py

@@ -4,7 +4,6 @@
 are preserved for backwards compatibility.
 """
 
-
 import os
 from glob import glob
 

nipype/interfaces/ants/registration.py

@@ -1,6 +1,7 @@
 """The ants module provides basic functions for interfacing with ants
    functions.
 """
+
 import os
 
 from ...utils.filemanip import ensure_list

nipype/interfaces/ants/resampling.py

@@ -1,5 +1,6 @@
 """ANTS Apply Transforms interface
 """
+
 import os
 
 from .base import ANTSCommand, ANTSCommandInputSpec

nipype/interfaces/ants/segmentation.py

@@ -1,4 +1,5 @@
 """Wrappers for segmentation utilities within ANTs."""
+
 import os
 from glob import glob
 from ...external.due import BibTeX

nipype/interfaces/ants/utils.py

@@ -1,4 +1,5 @@
 """ANTs' utilities."""
+
 import os
 from warnings import warn
 from ..base import traits, isdefined, TraitedSpec, File, Str, InputMultiObject

nipype/interfaces/base/core.py

@@ -380,9 +380,11 @@ def run(self, cwd=None, ignore_exception=None, **inputs):
         """
         rtc = RuntimeContext(
             resource_monitor=config.resource_monitor and self.resource_monitor,
-            ignore_exception=ignore_exception
-            if ignore_exception is not None
-            else self.ignore_exception,
+            ignore_exception=(
+                ignore_exception
+                if ignore_exception is not None
+                else self.ignore_exception
+            ),
         )
 
         with indirectory(cwd or os.getcwd()):

nipype/interfaces/c3.py

@@ -1,4 +1,5 @@
 """Convert3D is a command-line tool for converting 3D images between common file formats."""
+
 import os
 from glob import glob