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[![codecov](https://codecov.io/gh/poldracklab/nitransforms/branch/master/graph/badge.svg)](https://codecov.io/gh/poldracklab/nitransforms)
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A development repo for [nipy/nibabel#656](https://github.com/nipy/nibabel/pull/656)
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## About
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Spatial transforms formalize mappings between coordinates of objects in biomedical images.
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Transforms typically are the outcome of image registration methodologies, which estimate
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the alignment between two images.
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Image registration is a prominent task present in nearly all standard image processing
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and analysis pipelines.
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The proliferation of software implementations of image registration methodologies has
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resulted in a spread of data structures and file formats used to preserve and communicate
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transforms.
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This segregation of formats precludes the compatibility between tools and endangers the
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reproducibility of results.
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We propose a software tool capable of converting between formats and resampling images
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to apply transforms generated by the most popular neuroimaging packages and libraries
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(AFNI, FSL, FreeSurfer, ITK, and SPM).
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The proposed software is subject to continuous integration tests to check the
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compatibility with each supported tool after every change to the code base.
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Compatibility between software tools and imaging formats is a necessary bridge
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to ensure the reproducibility of results and enable the optimization and evaluation
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of current image processing and analysis workflows.

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