Merge pull request #62 from nipype/new-syntax

regenerated packages with new syntax

Author: tclose

.github/workflows/auto-conv.yaml

@@ -0,0 +1,66 @@
+#This workflow will install Python dependencies, run tests and lint with a variety of Python versions
+# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
+
+# For deployment, it will be necessary to create a PyPI API token and store it as a secret
+# https://docs.github.com/en/actions/reference/encrypted-secrets
+
+name: Auto-convert Nipype tasks to Pydra
+
+on:
+    workflow_dispatch: # Trigger this workflow manually or via a repository dispatch event
+    repository_dispatch:
+        types: [auto-conv]
+
+permissions:
+  contents: write
+  pages: write
+  id-token: write
+
+jobs:
+
+  auto-conv:
+    runs-on: ubuntu-latest
+    steps:
+
+    - name: Checkout
+      uses: actions/checkout@v4
+
+    - name: Checkout auto-conv branch
+      run: git checkout auto-conv
+
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: '3.13'
+
+    - name: Install build dependencies
+      run: python -m pip install --upgrade pip
+
+    - name: Install requirements
+      run: python -m pip install -r ./nipype-auto-conv/requirements.txt
+
+    - name: Run automatic Nipype > Pydra conversion
+      run: ./nipype-auto-conv/generate
+
+    - name: Create branch that rebases main on auto-conv
+      run: |
+        git config --local user.email "[email protected]"
+        git config --local user.name "Github Action"
+        git checkout -b main-rebase main
+        git rebase auto-conv
+
+    - name: Create pull request
+      uses: peter-evans/create-pull-request@v4
+      with:
+        branch: main-rebase
+        title: 'Rebase main on auto-conv'
+        body: 'This PR rebases the main branch on the auto-conv branch to include the latest Nipype to Pydra conversions.'
+        base: main
+        commit-message: 'Rebase main on auto-conv'
+        labels: auto-conv
+
+    - uses: actions/upload-artifact@v4
+      with:
+        name: converted-nipype
+        path: pydra/tasks/ants/v2
+        retention-days: 7