debugging ci-cd

Author: tclose

.github/workflows/ci-cd.yaml

@@ -38,6 +38,46 @@ jobs:
       run: |
           sudo apt-get update
           sudo apt-get install clang qt6-base-dev libglvnd-dev libeigen3-dev zlib1g-dev libfftw3-dev ninja-build
+    - name: Run sccache-cache
+      uses: mozilla-actions/[email protected]
+    - name: Get CMake
+      uses: lukka/get-cmake@latest
+      with:
+        cmakeVersion: '3.16.3'
+    - name: Print CMake version
+      run: cmake --version
+    - name: Clone latest MRtrix and switch to latest tag
+      run: |
+        mkdir $MRTRIX_HOME
+        sudo chown -R $USER $MRTRIX_HOME
+        git clone https://github.com/tclose/mrtrix3.git $MRTRIX_HOME/src
+        cd $MRTRIX_HOME/src
+        git checkout print-pydra-dev
+        git tag -a $MRTRIX_VERSION -m"Tag used to create a pydra-task-mrtrix3 release"
+        git describe --abbrev=0
+# echo "MRTRIX_VERSION=$(git describe --tags --abbrev=0)" >> $GITHUB_ENV
+# git checkout $MRTRIX_VERSION
+    - name: configure
+      run: |
+        cd $MRTRIX_HOME/src
+        cmake \
+        -B build \
+        -G Ninja \
+        -D CMAKE_BUILD_TYPE=Release \
+        -D MRTRIX_BUILD_TESTS=ON \
+        -D MRTRIX_STL_DEBUGGING=ON \
+        -D MRTRIX_WARNINGS_AS_ERRORS=ON \
+        -D CMAKE_C_COMPILER=clang \
+        -D CMAKE_CXX_COMPILER=clang++ \
+        -D CMAKE_INSTALL_PREFIX=$MRTRIX_INSTALL
+    - name: Build Mrtrix
+      run: |
+        cd $MRTRIX_HOME/src
+        cmake --build build
+    - name: Install Mrtrix
+      run: |
+        cd $MRTRIX_HOME/src
+        cmake --install build
     - name: Checkout code
       uses: actions/checkout@v2
     - name: Unset header
@@ -49,13 +89,6 @@ jobs:
     - name: Strip auto package from gitignore so it is included in package
       run: |
         sed -i '/\/pydra\/tasks\/mrtrix3\/${{ env.SUBPKG_NAME }}/d' .gitignore
-    - name: Download MRtrix3 install
-      uses: actions/download-artifact@v4
-      with:
-        name: MRtrix3
-        path: ${{ env.MRTRIX_INSTALL}}
-    - name: Make commands executable
-      run: chmod +x ${{ env.MRTRIX_INSTALL }}/bin/*
     - name: Set PATH Variable
       run: echo "PATH=$PATH:$MRTRIX_INSTALL/bin" >> $GITHUB_ENV
     - name: Set LD_LIBRARY_PATH Variable