Merge pull request #602 from nipype/prerelease

MNT: Prerelease updates

Author: effigies

.circleci/config.yml

@@ -48,6 +48,7 @@ jobs:
           name: Install deps
           command: |
             pip install --upgrade pip
+            pip install --no-cache-dir -r docs/requirements.txt
             pip install --no-cache-dir .[doc]
       - run:
           name: Build only this commit

.flake8

@@ -8,6 +8,5 @@ exclude =
     docs/tools/
     docs/conf.py
     pydra/_version.py
-    versioneer.py
 max-line-length=105
 ignore = E203,W503,F541

.gitignore

@@ -17,3 +17,6 @@ cov.xml
 .idea
 
 .DS_Store
+
+# This can be generated in-tree. We never want to commit it.
+pydra/_version.py

.zenodo.json

@@ -70,15 +70,15 @@
       "name": "Close, Thomas G.",
       "orcid": "0000-0002-4160-2134"
     },
-    {
-      "affiliation": "MIT, HMS",
-      "name": "Ghosh, Satrajit",
-      "orcid": "0000-0002-5312-6729"
-    },
     {
       "affiliation": "Paris Brain Institute",
       "name": "Vaillant, Ghislain",
       "orcid": "0000-0003-0267-3033"
+    },
+    {
+      "affiliation": "MIT, HMS",
+      "name": "Ghosh, Satrajit",
+      "orcid": "0000-0002-5312-6729"
     }
   ],
   "keywords": [

codecov.yml

@@ -3,8 +3,6 @@ coverage:
   ignore:          # files and folders that will be removed during processing
     - "**/tests"
     - "pydra/_version.py"
-    - "setup.py"
-    - "versioneer.py"
   status:
     project:
       default:

docs/conf.py

@@ -45,8 +45,8 @@
     "sphinx.ext.ifconfig",
     "sphinx.ext.linkcode",
     "sphinx.ext.githubpages",
+    "sphinx.ext.napoleon",
     "sphinxcontrib.apidoc",
-    "sphinxcontrib.napoleon",
 ]
 
 # Add any paths that contain templates here, relative to this directory.
@@ -89,7 +89,7 @@
 napoleon_custom_sections = [("Inputs", "Parameters"), ("Outputs", "Parameters")]
 
 # Intersphinx
-intersphinx_mapping = {"https://docs.python.org/": None}
+intersphinx_mapping = {"https://docs.python.org/3/": None}
 
 # Linkcode
 # The following is used by sphinx.ext.linkcode to provide links to github

docs/requirements.txt

@@ -0,0 +1,3 @@
+# This requirements file includes unreleased dependencies above and beyond those
+# specified in the project.optional-dependencies.doc table of pyproject.toml
+git+https://github.com/effigies/sphinxcontrib-versioning.git@master#egg=sphinxcontrib-versioning

pyproject.toml

@@ -32,8 +32,13 @@ classifiers = [
     "Intended Audience :: Science/Research",
     "License :: OSI Approved :: Apache Software License",
     "Operating System :: MacOS :: MacOS X",
+    "Operating System :: Microsoft :: Windows",
     "Operating System :: POSIX :: Linux",
-    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.7",
+    "Programming Language :: Python :: 3.8",
+    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
     "Topic :: Scientific/Engineering",
 ]
 dynamic = ["version"]
@@ -49,14 +54,10 @@ dev = [
     "pydra[test]",
 ]
 doc = [
-    "attrs >=19.1.0",
-    "cloudpickle",
-    "filelock",
     "packaging",
     "sphinx >=2.1.2",
     "sphinx_rtd_theme",
     "sphinxcontrib-apidoc ~=0.3.0",
-    "sphinxcontrib-napoleon",
     "sphinxcontrib-versioning",
 ]
 test = [