[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

Author: pre-commit-ci[bot]

docs/sphinxext/github_link.py

@@ -2,6 +2,7 @@
 This script comes from scikit-learn:
 https://github.com/scikit-learn/scikit-learn/blob/master/doc/sphinxext/github_link.py
 """
+
 import inspect
 import os
 import subprocess

pydra/__init__.py

@@ -5,6 +5,7 @@
 first-class operations. It forms the core of the Nipype 2.0 ecosystem.
 
 """
+
 # This call enables pydra.tasks to be used as a namespace package when installed
 # in editable mode. In normal installations it has no effect.
 __path__ = __import__("pkgutil").extend_path(__path__, __name__)

pydra/engine/__init__.py

@@ -1,4 +1,5 @@
 """The core of the workflow engine."""
+
 from .submitter import Submitter
 from .core import Workflow
 from .task import AuditFlag, ShellCommandTask

pydra/engine/audit.py

@@ -1,4 +1,5 @@
 """Module to keep track of provenance information."""
+
 import os
 import json
 import attr

pydra/engine/core.py

@@ -1,4 +1,5 @@
 """Basic processing graph elements."""
+
 import abc
 import json
 import logging

pydra/engine/graph.py

@@ -1,4 +1,5 @@
 """Data structure to support :class:`~pydra.engine.core.Workflow` tasks."""
+
 from copy import copy
 from pathlib import Path
 import subprocess as sp

pydra/engine/helpers.py

@@ -1,4 +1,5 @@
 """Administrative support for the engine framework."""
+
 import asyncio
 import asyncio.subprocess as asp
 from pathlib import Path

pydra/engine/specs.py

@@ -1,4 +1,5 @@
 """Task I/O specifications."""
+
 from pathlib import Path
 import typing as ty
 import inspect

pydra/engine/state.py

@@ -1,4 +1,5 @@
 """Keeping track of mapping and reduce operations over tasks."""
+
 from copy import deepcopy
 import itertools
 from functools import reduce

pydra/engine/submitter.py

@@ -1,4 +1,5 @@
 """Handle execution backends."""
+
 import asyncio
 import pickle
 from uuid import uuid4