chore(ci): Fix lost pydra checkout, missing uv installation

Author: effigies

.github/workflows/ci-cd.yml

@@ -117,6 +117,11 @@ jobs:
         run: |
           echo ${{ github.ref }}
           singularity --version
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+      - name: Install the latest version of uv
+        uses: astral-sh/setup-uv@v5
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v5
         with: