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renamed tutorials to give natural order
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new-docs/source/index.rst

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@@ -15,10 +15,10 @@ multiparameter map-reduce operations, in Python code and the use of a global cac
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Pydra's key features are:
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* Combine diverse tasks, implemented in `Python functions <./tutorial/python.html>`__ or stand-alone `shell commands <./tutorial/shell.html>`__, into coherent `workflows <./tutorial/workflow.html>`__
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* Combine diverse tasks, implemented in `Python functions <./tutorial/3-python.html>`__ or stand-alone `shell commands <./tutorial/4-shell.html>`__, into coherent `workflows <./tutorial/5-workflow.html>`__
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* Map-reduce like semantics (see :ref:`Splitting and combining`)
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* Dynamic workflow construction using Python code (see :ref:`Dynamic construction`)
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* Modular execution systems for varied deployment on cloud, HPC, etc... (see `Execution options <./tutorial/advanced-execution.html>`__)
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* Modular execution systems for varied deployment on cloud, HPC, etc... (see `Execution options <./tutorial/2-advanced-execution.html>`__)
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* Support for the execution of tasks in containerized environments (see :ref:`Containers and environments`)
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* Global caching to reduce recomputation (see :ref:`Hashing and caching`)
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* Support for strong type-checking, including file types, at workflow construction time (see :ref:`Typing and file-formats`)
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:caption: Tutorials: Execution
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tutorial/getting-started
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tutorial/advanced-execution
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tutorial/1-getting-started
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tutorial/2-advanced-execution
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.. toctree::
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:maxdepth: 2
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:caption: Tutorials: Design
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:hidden:
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tutorial/python
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tutorial/shell
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tutorial/workflow
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tutorial/canonical-form
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tutorial/3-python
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tutorial/4-shell
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tutorial/5-workflow
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tutorial/6-canonical-form
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.. toctree::

new-docs/source/tutorial/advanced-execution.ipynb renamed to new-docs/source/tutorial/2-advanced-execution.ipynb

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"inputs then the location of its output directory will also be the same, and the outputs\n",
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"generated by the previous run are reused.\n",
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"\n",
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"For example, using the MrGrid example from the [Getting Started Tutorial](./getting-started.html)\n"
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"For example, using the MrGrid example from the [Getting Started Tutorial](./1-getting-started.html)\n"
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new-docs/source/tutorial/canonical-form.ipynb renamed to new-docs/source/tutorial/6-canonical-form.ipynb

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"`pydra.design.*.define` decorators/functions are translated to\n",
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"[dataclasses](https://docs.python.org/3/library/dataclasses.html) by the\n",
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"[Attrs](https://www.attrs.org/en/stable/). While the more compact syntax described\n",
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"in the [Python-tasks](./python.html), [Shell-tasks](./shell.html) and [Workflow](./workflow.html)\n",
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"in the [Python-tasks](./3-python.html), [Shell-tasks](./4-shell.html) and [Workflow](./5-workflow.html)\n",
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"tutorials is convenient when designing tasks for specific use cases, it is too magical\n",
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"for linters follow. Therefore, when designing task definitions to be used by third\n",
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"parties (e.g. `pydra-fsl`, `pydra-ants`) it is recommended to favour the, more\n",

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