chore: renamed *.Outputs._from_task to _from_job to match new nomenclature

Author: tclose

pydra/compose/base/task.py

@@ -51,7 +51,7 @@ def inputs(self):
         return self._node.inputs
 
     @classmethod
-    def _from_task(cls, job: "Job[TaskType]") -> Self:
+    def _from_job(cls, job: "Job[TaskType]") -> Self:
         """Collect the outputs of a job. This is just an abstract base method that
         should be used by derived classes to set default values for the outputs.
 

pydra/compose/python.py

@@ -203,7 +203,7 @@ def make(wrapped: ty.Callable | type) -> Task:
 class PythonOutputs(base.Outputs):
 
     @classmethod
-    def _from_task(cls, job: "Job[PythonTask]") -> ty.Self:
+    def _from_job(cls, job: "Job[PythonTask]") -> ty.Self:
         """Collect the outputs of a job from a combination of the provided inputs,
         the objects in the output directory, and the stdout and stderr of the process.
 

pydra/compose/shell/task.py

@@ -56,7 +56,7 @@ class ShellOutputs(base.Outputs):
     stderr: str = field.out(name="stderr", type=str, help=STDERR_HELP)
 
     @classmethod
-    def _from_task(cls, job: "Job[Task]") -> ty.Self:
+    def _from_job(cls, job: "Job[Task]") -> ty.Self:
         """Collect the outputs of a shell process from a combination of the provided inputs,
         the objects in the output directory, and the stdout and stderr of the process.
 

pydra/compose/workflow.py

@@ -291,7 +291,7 @@ def cast(field: ty.Any, new_type: type[U]) -> U:
 class WorkflowOutputs(base.Outputs):
 
     @classmethod
-    def _from_task(cls, job: "Job[WorkflowTask]") -> ty.Self:
+    def _from_job(cls, job: "Job[WorkflowTask]") -> ty.Self:
         """Collect the outputs of a workflow job from the outputs of the nodes in the
 
         Parameters