adds check to parse_command_line_template to catch options that don't have trailing field

tclose · tclose · commit f16ce8945614 · 2025-04-29T16:35:35.000+10:00
diff --git a/pydra/compose/shell/builder.py b/pydra/compose/shell/builder.py
@@ -512,6 +512,9 @@ def from_type_str(type_str) -> type:
                 f"Found unknown token {token!r} in command line template: {template}"
             )
 
+    if option:
+        raise ValueError(f"Found an option without a field: {option!r}")
+
     remaining_pos = remaining_positions(arguments, len(arguments) + 1, 1)
 
     for argument in arguments:

Original file line number	Diff line number	Diff line change
`@@ -512,6 +512,9 @@ def from_type_str(type_str) -> type:`
`512`	`512`	`f"Found unknown token {token!r} in command line template: {template}"`
`513`	`513`	`)`
`514`	`514`
	`515`	`+ if option:`
	`516`	`+ raise ValueError(f"Found an option without a field: {option!r}")`
	`517`	`+`
`515`	`518`	`remaining_pos = remaining_positions(arguments, len(arguments) + 1, 1)`
`516`	`519`
`517`	`520`	`for argument in arguments:`