simplifying quarto outputs to make sure the website builds

Author: nrminor

.gitignore

@@ -69,7 +69,6 @@
 !/docs
 !/docs/*.qmd
 !/docs/*.md
-!/docs/*.pdf
 !/docs/*.css
 
 # globus adapter

_quarto.yml

@@ -91,9 +91,6 @@ format:
     smooth-scroll: true
     anchor-sections: true
     # css: docs/styles.css
-  typst:
-    toc: true
-    number-sections: true
   gfm:
     toc: true
     toc-depth: 3

docs/data_management.pdf

@@ -5,11 +5,9 @@ format:
     html:
         embed-resources: true
         keep-ipynb: false
-    typst: default
     gfm:
         wrap: none
 editor: source
-engine: knitr
 ---
 
 Coming soon! This tutorial will cover managing data assets reproducibly with either of two command-line tools: [SciDataFlow](https://github.com/vsbuffalo/scidataflow) and [`refman`](https://github.com/nrminor/refman).

docs/data_management.qmd

@@ -5,11 +5,9 @@ format:
     html:
         embed-resources: true
         keep-ipynb: false
-    typst: default
     gfm:
         wrap: none
 editor: source
-engine: knitr
 ---
 
 ## OneRoof Development Environment

docs/developer.pdf

@@ -5,11 +5,9 @@ format:
     html:
         embed-resources: true
         keep-ipynb: false
-    typst: default
     gfm:
         wrap: none
 editor: source
-engine: knitr
 execute:
     echo: false
     eval: false

docs/developer.qmd

@@ -12,10 +12,6 @@ format:
     code-fold: true
     code-tools: true
     highlight-style: github
-  typst:
-    toc: true
-    number-sections: true
-    colorlinks: true
   gfm:
     toc: true
     toc-depth: 3