Issue Installing on MacOS #187
Description
Hi All, ive run into an issue when trying to install. Can one of you please assist?
Thanks!
(minimal_ds_2) richardyang@richarddeMacBook-Pro libact % sudo pip install libact
DEPRECATION: Python 2.7 reached the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 is no longer maintained. pip 21.0 will drop support for Python 2.7 in January 2021. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
WARNING: The directory '/Users/richardyang/Library/Caches/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you may want sudo's -H flag.
Collecting libact
Downloading libact-0.1.6.tar.gz (118 kB)
|████████████████████████████████| 118 kB 6.0 MB/s
Requirement already satisfied: setuptools in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from libact) (44.0.0.post20200102)
Requirement already satisfied: numpy in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from libact) (1.15.4)
Requirement already satisfied: scipy in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from libact) (1.2.1)
Requirement already satisfied: scikit-learn<=0.19.2 in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from libact) (0.19.2)
Requirement already satisfied: matplotlib in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from libact) (2.2.5)
Requirement already satisfied: Cython in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from libact) (0.29.23)
Requirement already satisfied: joblib in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from libact) (0.14.1)
Requirement already satisfied: backports.functools-lru-cache in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from matplotlib->libact) (1.6.1)
Requirement already satisfied: six>=1.10 in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from matplotlib->libact) (1.15.0)
Requirement already satisfied: pytz in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from matplotlib->libact) (2019.3)
Requirement already satisfied: python-dateutil>=2.1 in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from matplotlib->libact) (2.8.1)
Requirement already satisfied: cycler>=0.10 in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from matplotlib->libact) (0.10.0)
Requirement already satisfied: kiwisolver>=1.0.1 in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from matplotlib->libact) (1.1.0)
Requirement already satisfied: subprocess32 in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from matplotlib->libact) (3.5.4)
Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages (from matplotlib->libact) (2.4.7)
Building wheels for collected packages: libact
Building wheel for libact (setup.py) ... error
ERROR: Command errored out with exit status 1:
command: /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/bin/python2.7 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/tmp/pip-install-Yjd_ir/libact/setup.py'"'"'; file='"'"'/private/tmp/pip-install-Yjd_ir/libact/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /private/tmp/pip-wheel-pLSf5g
cwd: /private/tmp/pip-install-Yjd_ir/libact/
Complete output (75 lines):
Platform Detection: Mac OS X. Link to openblas...
Build VarianceReduction...
Build HintSVM...
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-10.6-x86_64-2.7
creating build/lib.macosx-10.6-x86_64-2.7/libact
copying libact/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact
creating build/lib.macosx-10.6-x86_64-2.7/libact/base
copying libact/base/interfaces.py -> build/lib.macosx-10.6-x86_64-2.7/libact/base
copying libact/base/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/base
copying libact/base/dataset.py -> build/lib.macosx-10.6-x86_64-2.7/libact/base
creating build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/perceptron.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/sklearn_adapter.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/logistic_regression.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/svm.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
creating build/lib.macosx-10.6-x86_64-2.7/libact/models/multilabel
copying libact/models/multilabel/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models/multilabel
copying libact/models/multilabel/binary_relevance.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models/multilabel
copying libact/models/multilabel/dummy_clf.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models/multilabel
creating build/lib.macosx-10.6-x86_64-2.7/libact/labelers
copying libact/labelers/ideal_labeler.py -> build/lib.macosx-10.6-x86_64-2.7/libact/labelers
copying libact/labelers/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/labelers
copying libact/labelers/interactive_labeler.py -> build/lib.macosx-10.6-x86_64-2.7/libact/labelers
creating build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/random_sampling.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/hintsvm.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/quire.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/active_learning_by_learning.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/variance_reduction.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/query_by_committee.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/density_weighted_meta.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/density_weighted_uncertainty_sampling.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/uncertainty_sampling.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
creating build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/cost_sensitive_reference_pair_encoding.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/maximum_margin_reduction.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/binary_minimization.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/multilabel_with_auxiliary_learner.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/adaptive_active_learning.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
creating build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/expected_error_reduction.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/mdsp.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/active_learning_with_cost_embedding.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/hierarchical_sampling.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
creating build/lib.macosx-10.6-x86_64-2.7/libact/utils
copying libact/utils/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/utils
running build_ext
building 'libact.query_strategies._variance_reduction' extension
C compiler: gcc -fno-strict-aliasing -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
creating build/temp.macosx-10.6-x86_64-2.7
creating build/temp.macosx-10.6-x86_64-2.7/libact
creating build/temp.macosx-10.6-x86_64-2.7/libact/query_strategies
creating build/temp.macosx-10.6-x86_64-2.7/libact/query_strategies/src
creating build/temp.macosx-10.6-x86_64-2.7/libact/query_strategies/src/variance_reduction
compile options: '-I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include/python2.7 -c'
extra options: '-std=c11'
gcc: libact/query_strategies/src/variance_reduction/variance_reduction.c
libact/query_strategies/src/variance_reduction/variance_reduction.c:5:10: fatal error: 'lapacke.h' file not found
#include <lapacke.h>
^~~~~~~~~~~
1 error generated.
libact/query_strategies/src/variance_reduction/variance_reduction.c:5:10: fatal error: 'lapacke.h' file not found
#include <lapacke.h>
^~~~~~~~~~~
1 error generated.
error: Command "gcc -fno-strict-aliasing -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include/python2.7 -c libact/query_strategies/src/variance_reduction/variance_reduction.c -o build/temp.macosx-10.6-x86_64-2.7/libact/query_strategies/src/variance_reduction/variance_reduction.o -std=c11" failed with exit status 1
ERROR: Failed building wheel for libact
Running setup.py clean for libact
Failed to build libact
Installing collected packages: libact
Running setup.py install for libact ... error
ERROR: Command errored out with exit status 1:
command: /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/bin/python2.7 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/tmp/pip-install-Yjd_ir/libact/setup.py'"'"'; file='"'"'/private/tmp/pip-install-Yjd_ir/libact/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /private/tmp/pip-record-uSORrJ/install-record.txt --single-version-externally-managed --compile --install-headers /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include/python2.7/libact
cwd: /private/tmp/pip-install-Yjd_ir/libact/
Complete output (75 lines):
Platform Detection: Mac OS X. Link to openblas...
Build VarianceReduction...
Build HintSVM...
running install
running build
running build_py
creating build
creating build/lib.macosx-10.6-x86_64-2.7
creating build/lib.macosx-10.6-x86_64-2.7/libact
copying libact/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact
creating build/lib.macosx-10.6-x86_64-2.7/libact/base
copying libact/base/interfaces.py -> build/lib.macosx-10.6-x86_64-2.7/libact/base
copying libact/base/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/base
copying libact/base/dataset.py -> build/lib.macosx-10.6-x86_64-2.7/libact/base
creating build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/perceptron.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/sklearn_adapter.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/logistic_regression.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
copying libact/models/svm.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models
creating build/lib.macosx-10.6-x86_64-2.7/libact/models/multilabel
copying libact/models/multilabel/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models/multilabel
copying libact/models/multilabel/binary_relevance.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models/multilabel
copying libact/models/multilabel/dummy_clf.py -> build/lib.macosx-10.6-x86_64-2.7/libact/models/multilabel
creating build/lib.macosx-10.6-x86_64-2.7/libact/labelers
copying libact/labelers/ideal_labeler.py -> build/lib.macosx-10.6-x86_64-2.7/libact/labelers
copying libact/labelers/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/labelers
copying libact/labelers/interactive_labeler.py -> build/lib.macosx-10.6-x86_64-2.7/libact/labelers
creating build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/random_sampling.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/hintsvm.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/quire.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/active_learning_by_learning.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/variance_reduction.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/query_by_committee.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/density_weighted_meta.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/density_weighted_uncertainty_sampling.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
copying libact/query_strategies/uncertainty_sampling.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies
creating build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/cost_sensitive_reference_pair_encoding.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/maximum_margin_reduction.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/binary_minimization.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/multilabel_with_auxiliary_learner.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
copying libact/query_strategies/multilabel/adaptive_active_learning.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multilabel
creating build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/expected_error_reduction.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/mdsp.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/active_learning_with_cost_embedding.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
copying libact/query_strategies/multiclass/hierarchical_sampling.py -> build/lib.macosx-10.6-x86_64-2.7/libact/query_strategies/multiclass
creating build/lib.macosx-10.6-x86_64-2.7/libact/utils
copying libact/utils/init.py -> build/lib.macosx-10.6-x86_64-2.7/libact/utils
running build_ext
building 'libact.query_strategies._variance_reduction' extension
C compiler: gcc -fno-strict-aliasing -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
creating build/temp.macosx-10.6-x86_64-2.7
creating build/temp.macosx-10.6-x86_64-2.7/libact
creating build/temp.macosx-10.6-x86_64-2.7/libact/query_strategies
creating build/temp.macosx-10.6-x86_64-2.7/libact/query_strategies/src
creating build/temp.macosx-10.6-x86_64-2.7/libact/query_strategies/src/variance_reduction
compile options: '-I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include/python2.7 -c'
extra options: '-std=c11'
gcc: libact/query_strategies/src/variance_reduction/variance_reduction.c
libact/query_strategies/src/variance_reduction/variance_reduction.c:5:10: fatal error: 'lapacke.h' file not found
#include <lapacke.h>
^~~~~~~~~~~
1 error generated.
libact/query_strategies/src/variance_reduction/variance_reduction.c:5:10: fatal error: 'lapacke.h' file not found
#include <lapacke.h>
^~~~~~~~~~~
1 error generated.
error: Command "gcc -fno-strict-aliasing -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include/python2.7 -c libact/query_strategies/src/variance_reduction/variance_reduction.c -o build/temp.macosx-10.6-x86_64-2.7/libact/query_strategies/src/variance_reduction/variance_reduction.o -std=c11" failed with exit status 1
----------------------------------------
ERROR: Command errored out with exit status 1: /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/bin/python2.7 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/tmp/pip-install-Yjd_ir/libact/setup.py'"'"'; file='"'"'/private/tmp/pip-install-Yjd_ir/libact/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /private/tmp/pip-record-uSORrJ/install-record.txt --single-version-externally-managed --compile --install-headers /Users/richardyang/opt/miniconda3/envs/minimal_ds_2/include/python2.7/libact Check the logs for full command output.