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shawntanzkshawntanzk
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New CL release Curation
Fixes #224 Fixes #237 Related to #231 Still requires CL refresh on BDSO
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‎src/patterns/data/default/CCN201912131_class_curation.tsv‎

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@@ -38,7 +38,7 @@ http://purl.obolibrary.org/obo/PCL_0012036 Inh L1-5 VIP PHLDB3 entrez:7432|e
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http://purl.obolibrary.org/obo/PCL_0012037 Inh L1-5 VIP LINC01013 entrez:7432|entrez:100507254 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0012038 Inh L3-6 VIP UG0898H09 entrez:7432|entrez:643763 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0012039 Inh L3-5 VIP TAC3 entrez:7432|entrez:6866 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0012040 Inh L1-6 SST NPY entrez:6750|entrez:4852 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0012040 Inh L1-6 SST NPY CL_4023121 PMID:34616066 entrez:6750|entrez:4852 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0012041 Inh L3-5 SST CDH3 entrez:6750|entrez:1001 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0012042 Inh L5 SST RPL35AP11 entrez:6750|entrez:100271314 PMID:34616066 UBERON:0005394
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http://purl.obolibrary.org/obo/PCL_0012043 Inh L5-6 SST ISX entrez:6750|entrez:91464 PMID:34616066

‎src/patterns/data/default/CCN201912132_class_curation.tsv‎

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@@ -77,9 +77,9 @@ http://purl.obolibrary.org/obo/PCL_0013075 Exc FEZF2 ARSJ entrez:100407617|e
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http://purl.obolibrary.org/obo/PCL_0013076 Exc THEMIS NTNG2 entrez:100403177|entrez:100405312 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013077 Exc FEZF2 CRYM entrez:100403177|entrez:100388738 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013078 OPC PDGFRA VCAN entrez:100412331|entrez:100402664 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013079 Astro FGFR3 EPHB1 entrez:100409938|entrez:100399267 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0013080 Astro FGFR3 NWD1 entrez:100409938|entrez:100895459 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0013081 Astro FGFR3 RCN2 entrez:100409938|entrez:100406707 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0013079 Astro FGFR3 EPHB1 entrez:100409938|entrez:100399267 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0013080 Astro FGFR3 NWD1 entrez:100409938|entrez:100895459 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0013081 Astro FGFR3 RCN2 entrez:100409938|entrez:100406707 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0013082 Astro FGFR3 GFAP entrez:100409938|entrez:100393644 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013083 Oligo OPALIN LOC103790018 entrez:100404930|entrez:103790018 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013084 Oligo OPALIN MOBP entrez:100404930|entrez:100392144 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
@@ -107,7 +107,7 @@ http://purl.obolibrary.org/obo/PCL_0013110 (Mouse MGE)-like CL:4023069 PMID:34
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http://purl.obolibrary.org/obo/PCL_0013111 (Mouse CGE/PoA)-like CL:4023070 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013112 (Mouse IT projecting)-like CL:4023008 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013113 (Mouse Non-IT projecting)-like This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013119 Sst Chodl(i) This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013119 Sst Chodl(i) CL_4023121 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013120 (Mouse Lamp5)-like_C2 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013121 (Mouse Sncg)-like_C1 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0013122 (Mouse Sncg)-like_C3 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.

‎src/patterns/data/default/CCN202002013_class_curation.tsv‎

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@@ -130,7 +130,7 @@ http://purl.obolibrary.org/obo/PCL_0011156 Sst-like_C1 This class repre
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http://purl.obolibrary.org/obo/PCL_0011161 L5 non-Martinotti cell CL:4023028 PMID:34616066 UBERON:0005394
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http://purl.obolibrary.org/obo/PCL_0011164 L2/3/5 fan Martinotti cell CL:4023030 PMID:34616066
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http://purl.obolibrary.org/obo/PCL_0011165 L5/6 non-Martinotti cell CL:4023118 PMID:34616066 UBERON:8440002
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http://purl.obolibrary.org/obo/PCL_0011170 L6 Th+ SST/PV cell UBERON:0005395
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http://purl.obolibrary.org/obo/PCL_0011170 L6 Th+ SST/PV cell CL:4023075 PMID:34616066 UBERON:0005395
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http://purl.obolibrary.org/obo/PCL_0011177 Upper FS Basket cell
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http://purl.obolibrary.org/obo/PCL_0011178 Chandelier CL:4023036 PMID:34616066 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.
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http://purl.obolibrary.org/obo/PCL_0011182 IT projecting CL:4023008 PMID:34616066 PATO:0070034 This class represents a cross-species homology grouping. Cross-species clustering based on transcriptomic similarity supports the assertion that this class represents a homology grouping.

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