Merge branch 'master' into dependabot/maven/org.junit.jupiter-junit-jupiter-engine-5.12.2

Author: ndegwamartin

.dockerignore

@@ -15,10 +15,12 @@
 # This is to ignore all `dwh` dirs; the root one has a lot of test parquet files
 # and we also commonly use this directory name for storing pipelines' outputs.
 **/dwh/
-
+!dwh/pom.xml
 # Ignoring other large directories that are not needed for the docker image.
 docker/mysql-build
 synthea-hiv/
+!synthea-hiv/pom.xml
 e2e-tests/
+!e2e-tests/pom.xml
 **/tmp
 **/venv*

.github/PULL_REQUEST_TEMPLATE.md

@@ -22,17 +22,27 @@ automated e2e/unit tests.
 <!--- Put an `x` in the box if you did the task -->
 <!--- If you forgot a task please follow the instructions below -->
 
-- [ ] I have read and will follow the [review process](https://github.com/GoogleCloudPlatform/openmrs-fhir-analytics/blob/master/doc/review_process.md).
+- [ ] I have read and will follow the
+      [review process](https://github.com/GoogleCloudPlatform/openmrs-fhir-analytics/blob/master/doc/review_process.md).
 - [ ] I am familiar with Google Style Guides for the language I have coded in.
 
-  No? Please take some time and review [Java](https://google.github.io/styleguide/javaguide.html) and [Python](https://google.github.io/styleguide/pyguide.html) style guides.
+  No? Please take some time and review
+  [Java](https://google.github.io/styleguide/javaguide.html) and
+  [Python](https://google.github.io/styleguide/pyguide.html) style guides.
 
-- [ ] My IDE is configured to follow the Google [**code styles**](https://google.github.io/styleguide/).
+- [ ] My IDE is configured to follow the Google
+      [**code styles**](https://google.github.io/styleguide/).
 
-  No? Unsure? -> [configure your IDE](https://github.com/google/google-java-format).
+  No? Unsure? ->
+  [configure your IDE](https://github.com/google/google-java-format).
 
-- [ ] I have **added tests** to cover my changes. (If you refactored existing code that was well tested you do not have to add tests)
-- [ ] I ran `mvn clean package` right before creating this pull request and added all formatting changes to my commit.
+- [ ] I have **added tests** to cover my changes. (If you refactored existing
+      code that was well tested you do not have to add tests)
+- [ ] I ran `mvn clean package` right before creating this pull request and
+      added all formatting changes to my commit.
+- [ ] If I made any Python code changes, I ran `black .`, `pylint .` and
+      `pyright` . right before creating this pull request and added all
+      formatting changes to my commit.
 - [ ] All new and existing **tests passed**.
 - [ ] My pull request is **based on the latest changes** of the master branch.
 

.gitignore

@@ -92,7 +92,9 @@ nb-configuration.xml
 .ipynb_checkpoints/
 **.pyc
 **__pycache__**
+*.egg-info/
 ##############################
 ## Data-warehouse files.
 ##############################
 docker/dwh/**
+e2e-tests/controller-spark/dwh/**