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Make sure query are cross groups
1 parent 837af45 commit c7f2252

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src/omero_zarr/extinfo.py

Lines changed: 4 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -38,6 +38,7 @@ def get_extinfo(conn: BlitzGateway, image: ImageWrapper) -> ExternalInfoI:
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select e from ExternalInfo as e
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where e.id = :id
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"""
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conn.SERVICE_OPTS.setOmeroGroup("-1")
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extinfo = conn.getQueryService().findByQuery(query, params)
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return extinfo
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return None
@@ -66,6 +67,7 @@ def _get_path(conn: BlitzGateway, image_id: int) -> str:
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join fetch usedFile.originalFile as f
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join fetch f.hasher where image.id = :id
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"""
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conn.SERVICE_OPTS.setOmeroGroup("-1")
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fs = conn.getQueryService().findByQuery(query, params)
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res = fs._getUsedFiles()[0]._clientPath._val
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return res
@@ -93,7 +95,7 @@ def _lookup(conn: BlitzGateway, type: str, oid: int) -> BlitzObjectWrapper:
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return obj
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def get_images(conn: BlitzGateway, object) -> tuple[ImageWrapper, str | None, int | None]:
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def get_images(conn: BlitzGateway, object) -> tuple[ImageWrapper, str, int]:
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"""
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Generator that yields images from any OMERO container object.
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@@ -143,7 +145,7 @@ def get_images(conn: BlitzGateway, object) -> tuple[ImageWrapper, str | None, in
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def set_external_info(conn: BlitzGateway, img: ImageI, well: str, idx: int,
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lsid: str | None = None, entityType: str | None = None, entityId: int | None = None) -> ImageI:
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lsid: str, entityType: str, entityId: int) -> ImageI:
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"""
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Set the external info for an OMERO image.
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