cicd: Added checkout to pull the code of the ci-core repository to get the scripts #TASK-8067

Author: juanfeSanahuja

.github/workflows/scripts/compile_same_branch.sh

@@ -0,0 +1,23 @@
+
+WORKSPACE=${WORKSPACE:-/home/runner/work/}
+
+
+function compile() {
+  local REPO=$1
+  if [ ! -d "${WORKSPACE}/$REPO" ]; then
+    echo "Directory ${WORKSPACE}/$REPO does not exist. Skip compile"
+    return 0;
+  fi
+  echo "::group::Compiling '$REPO' project from branch $BRANCH_NAME"
+  cd "${WORKSPACE}/$REPO" || exit 2
+  mvn clean install -DskipTests --no-transfer-progress
+  echo "::endgroup::"
+}
+
+## Comma separated list of repos to compile
+REPOS=$1
+
+IFS=',' read -ra REPO_ARRAY <<<"$REPOS"
+for REPO in "${REPO_ARRAY[@]}"; do
+  compile "$REPO"
+done

.github/workflows/scripts/get-xetabase-branch.sh

@@ -0,0 +1,59 @@
+#!/bin/bash
+set -e
+set -x
+# Function to calculate the corresponding branch of Xetabase project
+get_xetabase_branch() {
+  # Input parameter (branch name)
+  # Input parameter (branch name)
+  target_branch="$1"
+  current_branch="$2"
+
+  # If the branch begins with 'TASK' and exists in the opencga-enterprise repository, I return it
+  if [[ $current_branch == TASK* ]]; then
+    REPO_URI=
+    if [ -z "$ZETTA_REPO_ACCESS_TOKEN" ]; then
+      REPO_URI="git@github.com:zetta-genomics/opencga-enterprise.git"
+    else
+      REPO_URI="https://$ZETTA_REPO_ACCESS_TOKEN@github.com/zetta-genomics/opencga-enterprise.git"
+    fi
+    if [ "$(git ls-remote "$REPO_URI" "$current_branch" )" ] ; then
+      echo "$current_branch";
+      return 0;
+    fi
+  fi
+
+  # Check if the branch name is "develop" in that case return the same branch name
+  if [[ "$target_branch" == "develop" ]]; then
+    echo "develop"
+    return 0
+  fi
+
+  # Check if the branch name starts with "release-" and follows the patterns "release-a.x.x" or "release-a.b.x"
+  if [[ "$target_branch" =~ ^release-([0-9]+)\.x\.x$ ]] || [[ "$target_branch" =~ ^release-([0-9]+)\.([0-9]+)\.x$ ]]; then
+    # Extract the MAJOR part of the branch name
+    MAJOR=${BASH_REMATCH[1]}
+    # Calculate the XETABASE_MAJOR by subtracting 3 from MAJOR
+    XETABASE_MAJOR=$((MAJOR - 3))
+    # Check if the XETABASE_MAJOR is negative
+    if (( XETABASE_MAJOR < 0 )); then
+      echo "Error: 'MAJOR' digit after subtraction results in a negative number."
+      return 1
+    fi
+    # Construct and echo the new branch name
+    echo "release-$XETABASE_MAJOR.${target_branch#release-$MAJOR.}"
+    return 0
+  fi
+
+  # If the branch name does not match any of the expected patterns
+  echo "Error: The branch name is not correct."
+  return 1
+}
+
+# Check if the script receives exactly one argument
+if [ "$#" -ne 2 ]; then
+  echo "Usage: $0 <target-branch> <current-branch>"
+  exit 1
+fi
+
+# Call the function with the input branch name
+get_xetabase_branch "$1" "$2"