Update scPRINT parameter settings (#86)

* dbug scprint

* allowing flash attn

* Update _viash.yaml

* Update CHANGELOG

* adding some debug

* better model loading and new model

* final debug

* better now

* finish debug

* ending tests successfully

* removing flag

* new dataloader version

* Update CHANGELOG

* solving some issues

* update scprint

* Update src/methods/scprint/script.py

Co-authored-by: Luke Zappia <[email protected]>

* Update src/methods/scprint/script.py

* improve the scgpt installation (now uses flash attention)

* changing default parameters

* rm scgpt

---------

Co-authored-by: Luke Zappia <[email protected]>
Co-authored-by: Luke Zappia <[email protected]>
Co-authored-by: Robrecht Cannoodt <[email protected]>

Author: 3 people

src/methods/scprint/config.vsh.yaml

@@ -61,7 +61,7 @@ arguments:
   - name: --max_len
     type: integer
     description: The maximum length of the gene sequence.
-    default: 4000
+    default: 2300
 
 resources:
   - type: python_script