update method

Author: rcannood

.gitignore

@@ -3,7 +3,6 @@
 /work
 /.nextflow*
 /target
-/.vscode
 .DS_Store
 /output
 trace-*

.vscode/settings.json

@@ -0,0 +1,10 @@
+{
+  "yaml.schemas": {
+    "common/schemas/api_component_spec.yaml": "**/api/comp_*.yaml",
+    "common/schemas/api_file_format.yaml": "**/api/file_*.yaml",
+    "common/schemas/task_config.yaml": "_viash.yaml",
+    "common/schemas/task_method.yaml": "**/methods/**/config.vsh.yaml",
+    "common/schemas/task_control_method.yaml": "**/control_methods/**/config.vsh.yaml",
+    "common/schemas/task_metric.yaml": "**/metrics/**/config.vsh.yaml"
+  }
+}

_viash.yaml

@@ -1,4 +1,4 @@
-viash_version: 0.9.0
+viash_version: 0.9.4
 
 name: task_predict_modality
 organization: openproblems-bio

src/methods/neurips2022_shuji_suzuki/config.vsh.yaml

@@ -15,8 +15,8 @@ description: |
   
   For CITEseq: Uses correlation-based gene selection and pathway information
   For Multiome: Uses tSVD-based imputation and advanced preprocessing
-info:
-  repository_url: https://github.com/shu65/open-problems-multimodal/tree/main
+links:
+  repository: https://github.com/shu65/open-problems-multimodal/tree/main
 
 resources:
   - type: python_script