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lines changed Original file line number Diff line number Diff line change 11__merge__ : ../../api/comp_method.yaml
22name : suzuki_mlp
33label : Suzuki MLP
4- summary : Shuji Suzuki's winning neural network solution for multimodal single-cell integration .
4+ summary : Hierarchical encoder-decoder neural network with task-specific preprocessing and residual connections for cross-modal prediction .
55description : |
66 A hierarchical neural network encoder-decoder model based on Shuji Suzuki's 1st place solution
77 in the Open Problems Multimodal Single-Cell Integration competition. The model uses task-specific
88 preprocessing, SVD dimensionality reduction, and hierarchical MLP blocks with residual connections
99 for learning cross-modal mappings.
10+
11+ The original author's code was adapted by GitHub Copilot
12+ (using Claude Sonnet) to integrate with this repository's framework and standards.
1013references :
1114 doi : 10.1038/s41592-022-01652-z
15+ links :
16+ documentation : https://www.kaggle.com/competitions/open-problems-multimodal/discussion/348468
17+ repository : https://github.com/shu65/open-problems-multimodal
1218info :
13- documentation_url : https://github.com/shu65/open-problems-multimodal
14- repository_url : https://github.com/shu65/open-problems-multimodal
1519 preferred_normalization : log_cp10k
1620arguments :
1721 # Task configuration
@@ -92,7 +96,7 @@ resources:
9296 - path : utils.py
9397engines :
9498 - type : docker
95- image : openproblems/base_pytorch_nvidia:1.0.0
99+ image : openproblems/base_pytorch_nvidia:1
96100runners :
97101 - type : executable
98102 - type : nextflow
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