From 0ae1f75702f838b17be3286e2576180916c246ca Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" Date: Wed, 11 Jun 2025 13:10:12 +0200 Subject: [PATCH] Update image version to :1 --- src/control_methods/mean_per_gene/config.vsh.yaml | 2 +- src/control_methods/random_predict/config.vsh.yaml | 2 +- src/control_methods/solution/config.vsh.yaml | 2 +- src/control_methods/zeros/config.vsh.yaml | 2 +- src/data_processors/process_dataset/config.vsh.yaml | 2 +- src/methods/guanlab_dengkw_pm/config.vsh.yaml | 2 +- src/methods/knnr_py/config.vsh.yaml | 2 +- src/methods/knnr_r/config.vsh.yaml | 2 +- src/methods/lm/config.vsh.yaml | 2 +- src/methods/novel/novel_predict/config.vsh.yaml | 2 +- src/methods/novel/novel_train/config.vsh.yaml | 2 +- src/methods/simple_mlp/simple_mlp_predict/config.vsh.yaml | 2 +- src/methods/simple_mlp/simple_mlp_train/config.vsh.yaml | 2 +- src/metrics/correlation/config.vsh.yaml | 2 +- src/metrics/mse/config.vsh.yaml | 2 +- 15 files changed, 15 insertions(+), 15 deletions(-) diff --git a/src/control_methods/mean_per_gene/config.vsh.yaml b/src/control_methods/mean_per_gene/config.vsh.yaml index f111291..1c8e588 100644 --- a/src/control_methods/mean_per_gene/config.vsh.yaml +++ b/src/control_methods/mean_per_gene/config.vsh.yaml @@ -8,7 +8,7 @@ resources: path: script.py engines: - type: docker - image: openproblems/base_python:1.0.0 + image: openproblems/base_python:1 runners: - type: executable - type: nextflow diff --git a/src/control_methods/random_predict/config.vsh.yaml b/src/control_methods/random_predict/config.vsh.yaml index 9e2bd0d..04d36dc 100644 --- a/src/control_methods/random_predict/config.vsh.yaml +++ b/src/control_methods/random_predict/config.vsh.yaml @@ -8,7 +8,7 @@ resources: path: script.R engines: - type: docker - image: openproblems/base_r:1.0.0 + image: openproblems/base_r:1 runners: - type: executable - type: nextflow diff --git a/src/control_methods/solution/config.vsh.yaml b/src/control_methods/solution/config.vsh.yaml index 7c5fab7..f107ae9 100644 --- a/src/control_methods/solution/config.vsh.yaml +++ b/src/control_methods/solution/config.vsh.yaml @@ -8,7 +8,7 @@ resources: path: script.R engines: - type: docker - image: openproblems/base_r:1.0.0 + image: openproblems/base_r:1 runners: - type: executable - type: nextflow diff --git a/src/control_methods/zeros/config.vsh.yaml b/src/control_methods/zeros/config.vsh.yaml index 0e1feaa..e774b70 100644 --- a/src/control_methods/zeros/config.vsh.yaml +++ b/src/control_methods/zeros/config.vsh.yaml @@ -8,7 +8,7 @@ resources: path: script.py engines: - type: docker - image: openproblems/base_python:1.0.0 + image: openproblems/base_python:1 runners: - type: executable - type: nextflow diff --git a/src/data_processors/process_dataset/config.vsh.yaml b/src/data_processors/process_dataset/config.vsh.yaml index e55243f..0ec2547 100644 --- a/src/data_processors/process_dataset/config.vsh.yaml +++ b/src/data_processors/process_dataset/config.vsh.yaml @@ -44,7 +44,7 @@ resources: path: script.R engines: - type: docker - image: openproblems/base_r:1.0.0 + image: openproblems/base_r:1 runners: - type: executable - type: nextflow diff --git a/src/methods/guanlab_dengkw_pm/config.vsh.yaml b/src/methods/guanlab_dengkw_pm/config.vsh.yaml index 9993cd0..e10d658 100644 --- a/src/methods/guanlab_dengkw_pm/config.vsh.yaml +++ b/src/methods/guanlab_dengkw_pm/config.vsh.yaml @@ -31,7 +31,7 @@ resources: path: script.py engines: - type: docker - image: openproblems/base_python:1.0.0 + image: openproblems/base_python:1 setup: - type: python packages: diff --git a/src/methods/knnr_py/config.vsh.yaml b/src/methods/knnr_py/config.vsh.yaml index 7a9bba6..ca8df0d 100644 --- a/src/methods/knnr_py/config.vsh.yaml +++ b/src/methods/knnr_py/config.vsh.yaml @@ -27,7 +27,7 @@ resources: path: script.py engines: - type: docker - image: openproblems/base_python:1.0.0 + image: openproblems/base_python:1 runners: - type: executable - type: nextflow diff --git a/src/methods/knnr_r/config.vsh.yaml b/src/methods/knnr_r/config.vsh.yaml index 52cdaa5..0af5de3 100644 --- a/src/methods/knnr_r/config.vsh.yaml +++ b/src/methods/knnr_r/config.vsh.yaml @@ -27,7 +27,7 @@ resources: path: script.R engines: - type: docker - image: openproblems/base_r:1.0.0 + image: openproblems/base_r:1 setup: - type: r cran: [ lmds, FNN, proxyC] diff --git a/src/methods/lm/config.vsh.yaml b/src/methods/lm/config.vsh.yaml index 146e02e..b41977b 100644 --- a/src/methods/lm/config.vsh.yaml +++ b/src/methods/lm/config.vsh.yaml @@ -23,7 +23,7 @@ resources: path: script.R engines: - type: docker - image: openproblems/base_r:1.0.0 + image: openproblems/base_r:1 setup: - type: r cran: [ lmds, RcppArmadillo, pbapply] diff --git a/src/methods/novel/novel_predict/config.vsh.yaml b/src/methods/novel/novel_predict/config.vsh.yaml index d93f42f..e6e80cb 100644 --- a/src/methods/novel/novel_predict/config.vsh.yaml +++ b/src/methods/novel/novel_predict/config.vsh.yaml @@ -12,7 +12,7 @@ resources: - path: ../helper_functions.py engines: - type: docker - image: openproblems/base_pytorch_nvidia:1.0.0 + image: openproblems/base_pytorch_nvidia:1 setup: - type: python packages: diff --git a/src/methods/novel/novel_train/config.vsh.yaml b/src/methods/novel/novel_train/config.vsh.yaml index 794524a..9acd4de 100644 --- a/src/methods/novel/novel_train/config.vsh.yaml +++ b/src/methods/novel/novel_train/config.vsh.yaml @@ -6,7 +6,7 @@ resources: - path: ../helper_functions.py engines: - type: docker - image: openproblems/base_pytorch_nvidia:1.0.0 + image: openproblems/base_pytorch_nvidia:1 setup: - type: python packages: diff --git a/src/methods/simple_mlp/simple_mlp_predict/config.vsh.yaml b/src/methods/simple_mlp/simple_mlp_predict/config.vsh.yaml index a61ba81..4c3dd79 100644 --- a/src/methods/simple_mlp/simple_mlp_predict/config.vsh.yaml +++ b/src/methods/simple_mlp/simple_mlp_predict/config.vsh.yaml @@ -13,7 +13,7 @@ resources: engines: - type: docker - image: openproblems/base_pytorch_nvidia:1.0.0 + image: openproblems/base_pytorch_nvidia:1 # run_args: ["--gpus all --ipc=host"] setup: - type: python diff --git a/src/methods/simple_mlp/simple_mlp_train/config.vsh.yaml b/src/methods/simple_mlp/simple_mlp_train/config.vsh.yaml index 29bff7e..c8fe0e4 100644 --- a/src/methods/simple_mlp/simple_mlp_train/config.vsh.yaml +++ b/src/methods/simple_mlp/simple_mlp_train/config.vsh.yaml @@ -6,7 +6,7 @@ resources: - path: ../resources/ engines: - type: docker - image: openproblems/base_pytorch_nvidia:1.0.0 + image: openproblems/base_pytorch_nvidia:1 setup: - type: python pypi: diff --git a/src/metrics/correlation/config.vsh.yaml b/src/metrics/correlation/config.vsh.yaml index 831a043..55fb2e5 100644 --- a/src/metrics/correlation/config.vsh.yaml +++ b/src/metrics/correlation/config.vsh.yaml @@ -61,7 +61,7 @@ resources: path: script.R engines: - type: docker - image: openproblems/base_r:1.0.0 + image: openproblems/base_r:1 setup: - type: r cran: [ proxyC, testthat, dynutils ] diff --git a/src/metrics/mse/config.vsh.yaml b/src/metrics/mse/config.vsh.yaml index b27ee63..54878aa 100644 --- a/src/metrics/mse/config.vsh.yaml +++ b/src/metrics/mse/config.vsh.yaml @@ -25,7 +25,7 @@ resources: path: script.py engines: - type: docker - image: openproblems/base_python:1.0.0 + image: openproblems/base_python:1 runners: - type: executable - type: nextflow