File tree Expand file tree Collapse file tree 1 file changed +3
-1
lines changed
src/main/scala/io/opentargets/etl/backend Expand file tree Collapse file tree 1 file changed +3
-1
lines changed Original file line number Diff line number Diff line change @@ -782,13 +782,15 @@ object Search extends LazyLogging {
782782
783783 // TODO check the overall score column name
784784 logger.info(" subselect indirect LLR associations just id and score and persist" )
785+
785786 val associationScores = inputDataFrame(" association" ).data
786787 .withColumn(" associationId" , concat_ws(" -" , col(" diseaseId" ), col(" targetId" )))
787- .withColumnRenamed(" overallDatasourceHarmonicScore " , " score" )
788+ .withColumnRenamed(" associationScore " , " score" )
788789 .select(associationColumns.head, associationColumns.tail: _* )
789790 .persist(StorageLevel .DISK_ONLY )
790791
791792 logger.info(" find associated drugs using evidence dataset" )
793+ inputDataFrame(" evidence" ).data.show()
792794 val associationsWithDrugsFromEvidences = inputDataFrame(" evidence" ).data
793795 .transform(Transformers .findAssociationsWithDrugs)
794796
You can’t perform that action at this time.
0 commit comments