Merge pull request #149 from openworm/development

Website updates

Author: pgleeson

README.md

@@ -9,12 +9,10 @@ Runs as a google app engine application, but can serve up simple content via a P
 
 For Python 2.x use: 
 
-    cd war
     python -m SimpleHTTPServer
 
 For Python 3.x use:
 
-    cd war
     python -m http.server
 
 Point your browser at: http://127.0.0.1:8000/

footer-content.html

@@ -53,12 +53,6 @@
 	    <li class="muted">
 		&middot;
 	    </li>
-	    <li>
-		<a href="http://docs.openworm.org/en/latest/modeling/" target="_blank">Roadmap</a>
-	    </li>
-	    <li class="muted">
-		&middot;
-	    </li>
 	    <li>
 		<a href="./contacts.html" data-pjax>Contacts</a>
 	    </li>

get_involved.html

@@ -164,8 +164,8 @@ <h1>WebMaster</h1>
 			    </div>
 			    <p class="lead">
 				Do you have experience as a WebMaster? Did you spot that we built our website with <a href="http://getbootstrap.com/" target="_blank">Bootstrap</a>?
-				Do you speak javascript?<br/><br/>
-				Mantaining our web site is an important job and we could use a hand.
+				Do you speak JavaScript?<br/><br/>
+				Maintaining our web site is an important job and we could use a hand.
 				If you would like to help us, <a href="./contacts.html">contact us</a> and link to some of the websites you have worked on.
 				Also feel free to give us any feedback on usability of this website; we like to constantly raise the bar!
 			    </p>

getting_started.html

@@ -68,9 +68,6 @@ <h1>Getting started</h1>
 			    <li>
 				<a href="#codeanddoc"><i class="fa fa-chevron-right"></i>Code and documentation</a>
 			    </li>
-			    <li>
-				<a href="#meetingarchive"><i class="fa fa-chevron-right"></i>Meeting archive</a>
-			    </li>
 			    <li>
 				<a href="#askaquestion"><i class="fa fa-chevron-right"></i>Ask a question</a>
 			    </li>
@@ -92,7 +89,7 @@ <h1>Our goal</h1>
 			    </div>
 			    <p class="lead">
 				OpenWorm aims to build the first comprehensive computational model of the <em>Caenorhabditis elegans</em> (<em>C. elegans</em>), a microscopic roundworm.
-				With only a <strong>thousand cells</strong>, it solves basic problems such as feeding, mate-finding and predator avoidance.
+				With less than a <strong>thousand cells</strong>, it solves basic problems such as feeding, mate-finding and predator avoidance.
 				Despite being extremely well studied in biology, this organism still eludes a deep, principled understanding of its biology.
 				<br/>
 			    </p>
@@ -112,7 +109,7 @@ <h4>A brief introduction to <em>C. elegans</em></h4>
 			    <p class="lead">
 				We are using a <strong>bottom-up</strong> approach, aimed at observing the worm behaviour <strong>emerge</strong> from a simulation of data derived from scientific experiments carried out over the past decade.
 				To do so we are incorporating the data available in the scientific community into software models.
-				We are engineering <strong>Geppetto</strong> and <strong>Sibernetic</strong>, open-source simulation platforms,
+				We have developed <strong>Geppetto</strong> and <strong>Sibernetic</strong>, open-source simulation platforms,
 				to be able to run these different models in concert.
 				We are also forging new collaborations with universities and research institutes to collect data that fill in the gaps.
 			    </p>
@@ -150,28 +147,6 @@ <h1>Code and documentation</h1>
 				Detailed documentation for each sub-project is available from the <a href="http://docs.openworm.org/en/0.9/projects/" target="_blank">Projects</a> page.
 			    </p>
 			</section>
-			<!-- Meeting archive ================================================== -->
-			<section id="meetingarchive">
-			    <div class="page-header">
-				<h1>Meetings Archive</h1>
-			    </div>
-			    <div class="span9 pagination-centered">
-				<i class="fa fa-facetime-video fa-xxl"></i>
-			    </div>
-			    <p class="lead">
-				The OpenWorm senior contributors meets every two weeks on public Google hangouts. The best way to get started is to sit down and have a look!
-				<br/>
-			    </p>
-			    <div class="span9 pagination-centered">
-				<a class="btn btn-primary btn-large" href="https://www.youtube.com/playlist?list=PL8ACJC0fGE7C7zlCBqkx1LMN1DHGKVp22" target="_blank">Video Archive</a>
-				<br/><br/>
-			    </div>
-			    <p class="lead">
-				While most meetings go into specifics of the project they do a good job at expressing the true spirit of OpenWorm: openness, transparency and of course, science!
-				<br/>
-			    </p>
-
-			</section>
 			<!-- Ask a question ================================================== -->
 			<section id="askaquestion">
 			    <div class="page-header">

header-content.html

@@ -23,9 +23,6 @@
             <li>
                 <a data-pjax href="./supporters.html">Supporters</a>
             </li>
-            <li>
-                <a data-pjax href="./media.html">Media</a>
-            </li>
             <li>
                 <a data-pjax href="./science.html">Science</a>
             </li>

img/biopics/padraig.jpg

@@ -88,7 +88,7 @@ <h1>OpenWorm</h1>
 					<a href="http://blog.openworm.org" target="_blank">Blog</a>
 				    </li>
 				    <li>
-					<a href="http://docs.openworm.org/en/latest/projects.html" target="_blank">Projects</a>
+					<a href="http://docs.openworm.org/en/latest/projects/" target="_blank">Projects</a>
 				    </li>
 				    <li>
 					<a id="geeks" href="http://www.redbubble.com/people/openworm/shop" target="_blank">For
@@ -419,7 +419,7 @@ <h2>Source code</h2>
 				   target="_blank">GitHub</a>
 				under
 				<a href="http://opensource.org/licenses/MIT" target="_blank">MIT</a>
-				licence. Different <a href="http://docs.openworm.org/en/latest/projects.html"
+				licence. Different <a href="http://docs.openworm.org/en/latest/projects/"
 						      target="_blank">sub-projects</a>
 				are hosted in different repositories.
 			    </p>

img/biopics/padraig.png

@@ -122,6 +122,9 @@
 		 }, {
                      name: "Ben Shih",
                      url: "https://github.com/benshih"
+		 }, {
+                    name: "Bhanu Prakash Singh",
+                    url: "https://github.com/3762bhanu"
 		 }, {
                      name: "Bóris Marin",
                      url: "https://github.com/borismarin"
@@ -199,6 +202,9 @@
                      // Gopal Sarma for Best Practices Badge
                      name: "Gopal Sarma",
                      url: "https://github.com/gsarma"
+		 }, {
+                     name: "Jaideep Seth",
+                     url: "https://github.com/jaideep-seth"
 		 }, {
                      name: "Jay Coggan",
                      url: "http://www.linkedin.com/pub/jay-s-coggan/27/215/741"
@@ -233,6 +239,10 @@
 		 }, {
                      name: "Luke Czapla",
                      url: "https://github.com/lukeczapla"
+		 },{
+					 // Mayukh Deb for Best Practices Badge
+					 name: "Mayukh Deb",
+                     url: "https://github.com/mayukhdeb"
 		 }, {
                      name: "Milad Jafary",
                      url: "https://github.com/miladjafary"
@@ -349,11 +359,7 @@
 		 }, {
                      name: "Wilson Zhao",
                      url: "https://github.com/wilzh40"
-		 }, {
-                     name: "Jaideep Seth",
-                     url: "https://github.com/jaideep-seth"
-		 }
-		 ];
+		 }];
 
 		 //Render the data into the template
 		 var rendered = Mustache.render(template, rowify(contributors, 6));
@@ -677,7 +683,7 @@ <h2> Sergey Khayrulin</h2>
     				</p>
 			    </div>
 			    <div class="span3 text-center people-card">
-    				<img class=" img-rounded img-responsive img-center" src="img/biopics/padraig.png" alt="">
+    				<img class=" img-rounded img-responsive img-center" src="img/biopics/padraig.jpg" alt="">
     				<h2>Padraig Gleeson</h2>
     				<p>
     				    <a href="https://www.linkedin.com/in/padraig-gleeson-1855b656?ppe=1" class="no-a-effect"

index.html

@@ -94,11 +94,11 @@ <h1>Supporters</h1>
 		    <h1>Academic Support</h1>
 		    <i class="fa fa-book fa-xl"></i>
 		    <p class="marketing-byline">
-			We would like to thank the following organizations that directly support OpenWorm contributors, which enables them to donate their time.
+			We would like to thank the following organizations that support OpenWorm contributors, which enables them to donate their time.
 		    </p>
 		    <div class="row-fluid">
 			<div>
-			    <p><b><a href="http://www.wellcome.ac.uk/" target="_blank">Wellcome Trust</a></b> via Padraig Gleeson / Matteo Cantarelli (Silver Lab, University College London)</p>
+			    <p><b><a href="http://www.wellcome.ac.uk/" target="_blank">Wellcome Trust</a></b> via Padraig Gleeson / Matteo Cantarelli and the <b><a href="https://www.opensourcebrain.org" target="_blank">Open Source Brain</a> project (Silver Lab, University College London)</p>
 			</div>
 			<div>
 			    <p><b><a href="http://www.mrc.ac.uk/" target="_blank">Medical Research Council</a></b> Centenary Award via Mike Vella (Department of Physiology, Development and Neuroscience, University of Cambridge)</p>